Gene NATL1_09891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_09891 
Symbol 
ID4781254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp907994 
End bp908431 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content38% 
IMG OID640084267 
Productcyclophilin-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_001014812 
Protein GI124025696 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.318938 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.154301 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAAG TATTGATGGA AACAGATAAA GGCCAATTGA CGATTGACCT CTTTGATAAT 
GATGCACCCA AAACAGTAGA AAACTTTTTG AAGCTTGTTA AAGAAGGTTT TTACAATGGC
CTTTCTTTTC ACAGAGTCAT TAATGGGTTT ATGGCTCAAG GGGGATGTCC AAACACAAGA
GAGGGCTCAC GAGGGATGCC TGGCACTGGA GGCCCTGGAT ATTCAATCAA TTGTGAAATT
AATCCAAACA AACATGAAGC TGGATCTCTT TCTATGGCCC ACGCAGGTAA GGATACTGGT
GGTAGCCAAT TCTTTTTAGT TCATGCTCCA CAACCACATT TGGATGGAGT ACATACTGTT
TTTGGTAAAA CTAATGATAT GAAAATTCTT CTATCTATCA CTAATGGTAC AAAGATTAAT
AGTGTAAGTA TTGTTTAA
 
Protein sequence
MSKVLMETDK GQLTIDLFDN DAPKTVENFL KLVKEGFYNG LSFHRVINGF MAQGGCPNTR 
EGSRGMPGTG GPGYSINCEI NPNKHEAGSL SMAHAGKDTG GSQFFLVHAP QPHLDGVHTV
FGKTNDMKIL LSITNGTKIN SVSIV