| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_09511 |
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| Symbol | pdhB |
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| ID | 4779833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | + |
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| Start bp | 875727 |
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| End bp | 876716 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640084228 |
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| Product | pyruvate dehydrogenase E1 beta subunit |
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| Protein accession | YP_001014774 |
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| Protein GI | 124025658 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.789221 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.154301 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAGGGA CTCTTTTATT TAATGCTCTT CGAGAAGCAA TTGATGAAGA AATGGGTAGA
GATCCCTTGG TATGCGTGAT GGGTGAGGAC GTTGGACAAT ATGGCGGGTC TTATAAAGTG
ACGAAAGATT TATATGAAAA ATATGGAGAG TTCAGAGTCT TAGATACCCC TATTGCTGAA
AATAGTTTTA CTGGTATGGC TGTTGGTGCA GCCATGACAG GTTTAAGACC AATTGTGGAA
GGGATGAATA TGGGTTTTTT GTTGCTTGCG TTTAATCAAA TATCAAACAA TATGGGAATG
CTTAGATATA CGAGCGGGGG AAATTTTACT ATTCCAACAG TTGTAAGAGG CCCTGGTGGT
GTTGGAAGGC AATTAGGCGC TGAACACAGT CAAAGACTTG AAGCCTATTT TCATGCAGTT
CCTGGTATCA AAATTGTCGC TTGTAGTACT CCTACAAATG CTAAAGGTCT AATGAAAGCT
GCTATAAGGG ACAATAATCC TGTTCTTTTC TTTGAACATG TTCTTCTATA TAACCTCACA
GAAGAGCTGC CTGAGGGTGA TTATGTCTGT GCCCTAGATC AAGCCGATTT AGTAAAGCAG
GGAAGCGACA TTACTATTTT GACTTATTCG AGAATGCGTC ACCACTGTTT AAAAGCAGTC
GAACTTCTTG AGGCTAAGGG AATTGATGTC GAATTAATTG ATTTAATTAG TCTTAAGCCT
TTTGATATGA ATACAATCTC TGAATCAATT AAAAAAACTC ATAGAGTCAT TATTGTTGAG
GAATGTATGA AAACAGGTGG TATTGCAGCT GAATTGATGT CTTTGATTAC TGAAAATTGC
TTCGATGATT TAGATTCTCC TCCTGTTCGT TTAAGCAGTC AGGATATTCC GACTCCTTAT
AATGGAAACC TAGAAAATTT AACCATTATT CAACCTCATC AGATAGTAGA TGCTGCTGAA
AAAATTATTA AAAATGGTGG ATTAGATTAA
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| Protein sequence | MKGTLLFNAL REAIDEEMGR DPLVCVMGED VGQYGGSYKV TKDLYEKYGE FRVLDTPIAE
NSFTGMAVGA AMTGLRPIVE GMNMGFLLLA FNQISNNMGM LRYTSGGNFT IPTVVRGPGG
VGRQLGAEHS QRLEAYFHAV PGIKIVACST PTNAKGLMKA AIRDNNPVLF FEHVLLYNLT
EELPEGDYVC ALDQADLVKQ GSDITILTYS RMRHHCLKAV ELLEAKGIDV ELIDLISLKP
FDMNTISESI KKTHRVIIVE ECMKTGGIAA ELMSLITENC FDDLDSPPVR LSSQDIPTPY
NGNLENLTII QPHQIVDAAE KIIKNGGLD
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