Gene NATL1_09441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_09441 
SymbolumuD 
ID4779662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp871951 
End bp872385 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content34% 
IMG OID640084221 
Productputative SOS mutagenesis protein UmuD 
Protein accessionYP_001014767 
Protein GI124025651 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.497301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0831546 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTCAA ATCGCTCTCG CTCTTCATCA ACAGAAGGCT TGTCGTCACT ATTAATTCCA 
ACTATTTCTG CAGGCTTTCC TTCTCCTGCG GAAGACTACA TAGAGCTCGG TATCGATCTA
AACAAATACT TAATCAAGAA TCCAATAAGT ACCTTCTTTC TACGTGTAAG CGGTAATTCA
ATGAATAACG CAGGAATTTA TAACAACGAT TTATTAATCA TAGATCGCAG TATAAACCCA
AATCCTGGAC ATATTGTAGT TGCTCTCTTG GATGGAGAAT TCACATTAAA AAGACTTATC
AAAAAGCAAG ATAGTTATTA TCTGAAAGCA GATAAAGAAA ATTATCCAGC AATAAACTTA
TATGAATATA TAGATATCCA AATATGGGGA GTAGCGATTT ATTCGATACA TGAACTACAA
CAATCAAAAG TATAA
 
Protein sequence
MGSNRSRSSS TEGLSSLLIP TISAGFPSPA EDYIELGIDL NKYLIKNPIS TFFLRVSGNS 
MNNAGIYNND LLIIDRSINP NPGHIVVALL DGEFTLKRLI KKQDSYYLKA DKENYPAINL
YEYIDIQIWG VAIYSIHELQ QSKV