Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_09441 |
Symbol | umuD |
ID | 4779662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | - |
Start bp | 871951 |
End bp | 872385 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640084221 |
Product | putative SOS mutagenesis protein UmuD |
Protein accession | YP_001014767 |
Protein GI | 124025651 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.497301 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0831546 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTTCAA ATCGCTCTCG CTCTTCATCA ACAGAAGGCT TGTCGTCACT ATTAATTCCA ACTATTTCTG CAGGCTTTCC TTCTCCTGCG GAAGACTACA TAGAGCTCGG TATCGATCTA AACAAATACT TAATCAAGAA TCCAATAAGT ACCTTCTTTC TACGTGTAAG CGGTAATTCA ATGAATAACG CAGGAATTTA TAACAACGAT TTATTAATCA TAGATCGCAG TATAAACCCA AATCCTGGAC ATATTGTAGT TGCTCTCTTG GATGGAGAAT TCACATTAAA AAGACTTATC AAAAAGCAAG ATAGTTATTA TCTGAAAGCA GATAAAGAAA ATTATCCAGC AATAAACTTA TATGAATATA TAGATATCCA AATATGGGGA GTAGCGATTT ATTCGATACA TGAACTACAA CAATCAAAAG TATAA
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Protein sequence | MGSNRSRSSS TEGLSSLLIP TISAGFPSPA EDYIELGIDL NKYLIKNPIS TFFLRVSGNS MNNAGIYNND LLIIDRSINP NPGHIVVALL DGEFTLKRLI KKQDSYYLKA DKENYPAINL YEYIDIQIWG VAIYSIHELQ QSKV
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