Gene NATL1_09331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_09331 
SymbolgatA 
ID4780706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp859859 
End bp861319 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content39% 
IMG OID640084210 
Productaspartyl/glutamyl-tRNA amidotransferase subunit A 
Protein accessionYP_001014756 
Protein GI124025640 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID[TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.963624 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0575081 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTTG AAGACTTACG CCAGAAATTA AAAAGTGGTG AGGTTTCTTC CAAAGAACTT 
GTTCAAGAAA AAATAAACCG AATAAATGAA TTAGATCCAA CTCTGAATTC CTTTTTAATT
GTTAATACTG AGCTAGCTCT AAGCAAAGCA GAGCATATCG ATAAACAAAT CGCTTCTGGC
GATCATTTAC CGCCTTTGTC AGGAATACCC ATTGCTATAA AAGACAATCT TTGTACAAAA
GGAATTAAGA CAACTTGCGC AAGCAAGATT TTGGACAACT TTGTCCCCCC ATACGAGTCA
ACAGTTACCA AAAAGCTTTT GAACGCAGGA GCAATAATGA TTGGCAAGAC AAATATGGAT
GAATTTGCTA TGGGGAGCTC TACAGAAACC TCTGCATTTG GTCCTACTTT GAATCCATGG
AACATTACAA AAGTTCCAGG AGGCAGCTCT GGTGGTAGCG CAGCTTCTGT TGCTGCCGGA
TTATGTTACG GATCTCTGGG TTCTGATACT GGCGGGTCAA TCCGACAACC TGCTTCTTTT
TGTGGCGTTG TTGGCATGAA GCCAACTTAT GGTCGAGTAA GTCGATGGGG GTTAATAGCT
TTTGCTAGTT CTTTAGATCA GGTTGGTCCA TTTGCGAATA ATGTTTCTGA TGCAGCTGAG
ATTTTGCAAG TTATATCTGG CAAGGATGAA TTGGATTCAA CTACTGTTGA TATTCCCGTT
CCCAATTATT TAGAGACTCT TTCTAAGTCA ATTAAGGGAA TGAAAATAGG TTTAATTGAT
AACTGCTTTG ATCATGAAGG TTTAGCCACT GATGTTAAAG AATCTGTTCT TAGCTCTGCC
TCGCTGCTAG AAAACTTAGG CGCAGAAATT GTTAATATTT CTTGTCCTCG TTTCAATGAT
GGAATTGCTA CTTATTACGT TATTGCCCCA TCTGAAGCTT CAGCGAATTT AGCCAGATAT
GACGGAGTCA AATATGGATT CCGCGCTGAA GATGAACAAT CTCTTATAGA GATGACCTCC
AAAAGTCGAG CACTTGGTTT TGGAAGTGAA GTTAAAAGAA GAATTCTTAT TGGAACTTAT
GCTCTATCCG CTGGTTATGT TGATGCTTAC TACAAAAAAG CCCAGCAAGT TCGAACTTTG
ATACGTAGAG ATTTTGATGA TGCTTTTAAA AAAGTAGATG TTTTGTTAGC GCCAACAGCA
CCTACTACTG CTTTTGGTTC TGGAGATAAT ATTGATAATC CAATGGCGAT GTATCTATCG
GATCTATTAA CTATTCCAGC AAATTTGGCT GGATTGCCTG CAATCAGCCT GCCGTGTGGT
TTTGATAAAT CCGATTTGCC TATAGGCTTG CAGCTAATAG GAAATGTTTT TGAAGAAGGA
AAGCTTCTTC AAGTGGCTAA TCAATTTGAG AAAGCTGCTG AGGTTTATAA AAATAGGCCT
AAAACAGATT TCACGTTATA A
 
Protein sequence
MTFEDLRQKL KSGEVSSKEL VQEKINRINE LDPTLNSFLI VNTELALSKA EHIDKQIASG 
DHLPPLSGIP IAIKDNLCTK GIKTTCASKI LDNFVPPYES TVTKKLLNAG AIMIGKTNMD
EFAMGSSTET SAFGPTLNPW NITKVPGGSS GGSAASVAAG LCYGSLGSDT GGSIRQPASF
CGVVGMKPTY GRVSRWGLIA FASSLDQVGP FANNVSDAAE ILQVISGKDE LDSTTVDIPV
PNYLETLSKS IKGMKIGLID NCFDHEGLAT DVKESVLSSA SLLENLGAEI VNISCPRFND
GIATYYVIAP SEASANLARY DGVKYGFRAE DEQSLIEMTS KSRALGFGSE VKRRILIGTY
ALSAGYVDAY YKKAQQVRTL IRRDFDDAFK KVDVLLAPTA PTTAFGSGDN IDNPMAMYLS
DLLTIPANLA GLPAISLPCG FDKSDLPIGL QLIGNVFEEG KLLQVANQFE KAAEVYKNRP
KTDFTL