Gene NATL1_09021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_09021 
Symbol 
ID4779129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp837137 
End bp837934 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content35% 
IMG OID640084178 
Productputative multidrug efflux ABC transporter 
Protein accessionYP_001014725 
Protein GI124025609 
COG category[R] General function prediction only 
COG ID[COG4587] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000244189 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAGAATAT TTGGATTGTC TTTCAAGGTC ATTAAGACCT TACTTACAAC GCAATATGCA 
TACATGTTGG AATATCGCAT CGAAATAGCT TTGTGGGCTC TTTCTGGAGT ACTACCATTT
ATTATGTTTT CTCTTTGGAG TCAAAATGAT GTTGGCAATT CATTTGGTCT AAATGATATA
GGGTTGGCAA GATATTTTTT AAGTGCTTTT CTAGTTAGGC AATTTTCAGT TGTTTGGGTT
GTCTTCTCGT TTGAGGAAGA TTCTCTTTCT GGTCGATTAT CTCCATATTT GCTGCAGCCT
TTGCACCCTC TATTTAGATA TGTTGCTTCT CACTTAGCAG AGCAGGCAAC AAGACTTCCT
TTCGCAATAG CCATAGCTAT TACTTTTTTT ATATTAAATC CATCATCTTT TTGGCTTCCC
TCACTACCTC AATTGTTTTT GGCGTACTTA TCAACTCACT TCGCTTTTAC TATTGCTTTT
CTTCTTCAAA GTTTAGTCGC TGCACTTTGC TTTTGGACTG AAAAATCTAG CGCTCTTGAG
AGATTAATAT TTGTTCCTTA TCTTTTTCTT TCTGGTTTAT TAGTACCTTT ATCAGCCTTT
CCTTCTAACG TTCTAAAAGT AGCAATGTTA ACGCCATTTC CCTATCTAAT TAATTTTCCA
GCAAAGATTT TATCAGGGAT GCCAGTTGAT ATTTTTAATG GCTTTTTAGC TCAGATTTTG
TGGATTTCAA TACTGGTACC TTCTGTAAAT ATTCTTTGGA AACTTGGTGT AAAAAGATAT
ACAGCAATGG GAGCCTAA
 
Protein sequence
MRIFGLSFKV IKTLLTTQYA YMLEYRIEIA LWALSGVLPF IMFSLWSQND VGNSFGLNDI 
GLARYFLSAF LVRQFSVVWV VFSFEEDSLS GRLSPYLLQP LHPLFRYVAS HLAEQATRLP
FAIAIAITFF ILNPSSFWLP SLPQLFLAYL STHFAFTIAF LLQSLVAALC FWTEKSSALE
RLIFVPYLFL SGLLVPLSAF PSNVLKVAML TPFPYLINFP AKILSGMPVD IFNGFLAQIL
WISILVPSVN ILWKLGVKRY TAMGA