Gene NATL1_08671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_08671 
Symbol 
ID4779467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp801144 
End bp802583 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content27% 
IMG OID640084142 
Producthypothetical protein 
Protein accessionYP_001014690 
Protein GI124025574 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0459434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000643383 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAGTTATC AAATTAATTT AAGAATCCAT GGTCATAGTT GTTTGGAACT GAGAACTACA 
ACAGACATAA TATTATTTGA TCCTTGGCTG AAAGGCTCAG CATACTGGAG ATCGTGGTGG
AATTTCCCAG AACAAAAAAA TATAGAAGAA TTAATTAGTG AAATATCAAA TGTAGAAAAT
ATTTATGTAT ATATTACTCA TCTTCATTGG GATCACTTTC ATGGACCTAG CTTGAGAATA
CTTTACAGAG AAATTCCCAA GATCAAATTT CTGATACCAA AAGTGCCCGA AACAAGATTA
AAAAATGATT TATTAAAAAT TTTGGGTAAC AAGATTAATA TCATTGAAAT TAATCATGGA
CAACTATATA TCGTTTCCCC TAATATAAAA ATTCAACCAT TTTTAGCCGG ACCAATACTT
ACAGATTCAG CTGTATTAAT AAATTGTGAT AATAATTATA TTTTGAATTT AAATGACAGT
AAGCAGCAAA AATTAATGAT TAATCAAATT AAATCTAATT TTAGGGAAGG TAAATTAAAA
GTAATGCTTA GAAGCCATGC TTCAGCAAAC TCACGAGTAT GCCAAAGGAA TCGTGACGGA
GGAGTTAAAT TAAAAGCTGA TAAAAAGATA GAAGAATATT CTAAAGAATT TTTATTAACG
GCAAGGATTT TTAAGCCTGA GGTTGCTATT CCATTTGCAT CAAATATGTG TTATTTACAT
AAGGATACAT ATAAATATAA TTTCTATTCT AATACTTCGG ATAAGTTATT AAAATTCTAC
AGAGAGAACA TTGAATACAG TGACATAAAT CTTAAACTAA TTCTTCCTGG TGAGAAATTA
AACGTTAATG ATTTAAAAAT TTCAGAGAAT AAAACTTCAA GAAATCAATT GTTTTCAGAT
AGGTATCAAG TTTTAAAATC CTATAGAGAA AAATATAAAA AGAAGATAGA AAGATCAGAG
TTTATTCAAG GAAAGGGATC TTTTTCTGAG ATAATTTTCA AGAAATATTT CTATAATGTA
TTTAAATATA CTCCATTTAT AATAAGTAAA CTTGTTCATG GTAAGGTGGC ATTTATTGAA
AAGAAAGATC ATATTTATAA TAAATTTTTT ATTGTTGATA TGCGGCGAAA GAAGATATTT
TTAAATGCAA TTAGTTATGA TGATTGTGAA ACTTTAATAA TAGTTCGCCC TGGAGTATTA
AATAGTTGTC TAATGCAAAA TAACCTTAAT TCTTTAGGAA TATCTAAATT ATTAGAAGTT
AGATCATCTT CAATCCGTCA ATATAATTTG TTTTTCGCGA TATGTGTTGC ATCTGAAATA
GGTTCTTATC CATTTATCTC GATCAAACAG AGTATAAGAA GTTTTAAAAT ATGGATTAGA
AGATTTAGAG AGATAATTGA TTATATTCTT ATTATTTTAA GGTTTAATAA GTTAATATAA
 
Protein sequence
MSYQINLRIH GHSCLELRTT TDIILFDPWL KGSAYWRSWW NFPEQKNIEE LISEISNVEN 
IYVYITHLHW DHFHGPSLRI LYREIPKIKF LIPKVPETRL KNDLLKILGN KINIIEINHG
QLYIVSPNIK IQPFLAGPIL TDSAVLINCD NNYILNLNDS KQQKLMINQI KSNFREGKLK
VMLRSHASAN SRVCQRNRDG GVKLKADKKI EEYSKEFLLT ARIFKPEVAI PFASNMCYLH
KDTYKYNFYS NTSDKLLKFY RENIEYSDIN LKLILPGEKL NVNDLKISEN KTSRNQLFSD
RYQVLKSYRE KYKKKIERSE FIQGKGSFSE IIFKKYFYNV FKYTPFIISK LVHGKVAFIE
KKDHIYNKFF IVDMRRKKIF LNAISYDDCE TLIIVRPGVL NSCLMQNNLN SLGISKLLEV
RSSSIRQYNL FFAICVASEI GSYPFISIKQ SIRSFKIWIR RFREIIDYIL IILRFNKLI