| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_08621 |
|---|
| Symbol | |
|---|
| ID | 4779332 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | - |
|---|
| Start bp | 792687 |
|---|
| End bp | 793934 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 640084137 |
|---|
| Product | glycosyltransferase-like protein |
|---|
| Protein accession | YP_001014685 |
|---|
| Protein GI | 124025569 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.784838 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.0000054897 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAAGA TTTGGATGAT AAATCAGTTT GCAAATACAC CTGATTTGCC AGGGCATACA
AGAAACTACG AAGTTGCTAA ATATTTAGTT AAAAATGGAT GGAGAGTAGA TTTATTTGCA
TCTGACTTTA ATCTTAGTCA GAGAAAGTAT TGCAAGTTAA AGAAATTTGA ATTATTTAAA
ATCAATAAAA TTGATGGAAT AAAATGGCAT TGGTTAAGAG TATCTTCTTA TTCAATTAAT
AATTGGAAAA GATATCTAAA CATATTAAGT TTTTCAATTC ATATATTTTT ATTTCTTATA
TTAAAATCTA TTCTATCTTT AAAAAGAGAG CAATTACCAA ATATAATATT AGCTAGTTCT
CCTCAATTAC CAGCAGCATA TTTTTGCTTA ATAGTTTCAA AAATTCTCCA TATACCATTG
GTTTTAGAAA TAAGAGATCT ATGGCCACAA ATTCTTATTG ATCTAGGAGA TAAAAGCAAA
GAAAACATAT TATATAGGAT ATTATATTGG ATGGAGCTTT TATTATATAA GGAATCAAAA
ATTATAGTTA TTTTATCTAA AGGGTCAAAG GAACATGTAG TAAAAAAAGG AGGGAAACTT
ATAAAATGGT TACCAAATGG GCCAGATCTA AGTAAATTCA AATTTTCAAG TCTACCTAAT
GAAGAATTAA CTTTTTCTTT TAATAGACCC TTTAGATTGG TATATGCGGG AGCTCACAGC
CAAGTTAATG GTTTGATGTA CGTTTTGAAT GCTGCTAAGT TATTGATCAA TCACCCAATT
GAAATTACAT TGATAGGGGA TGGTCCAGAG AAAAATAATC TTGTTGAACA ATCAAAAAAA
CTTGCTTTAA ATAATGTAAA ATTTTTAAAA CCTCATTCTA AAGATAATAT TCCAAAAATT
CTATCTACAT TCGATGCAAT ATTACTTTCA CTAATAGATT CTGACCTATT TAGATATGGA
ATATCTCCCA ATAAGTTATA TGATGCTTAT GCTCTTGGAA GACCAGTAAT AACTACTGTC
CCAGGAATGA TAAATGATGA AGTAGAGTCA AATAAATTAG GGACTACTTC AAGAGCATGT
GATTCATCTT CATTATCATT AGCAATAAAA AGATTAATGA ACACATCAAG GAGAGATAGA
GAAATGATGG GGATCAGAGC TAGATCTATA GCCGAAAAAA CATATTCAAG AAATCGAATC
AACAAAGAAT ATGATAAACT TCTGCGCTCA TTAATACCTA ATGAATAA
|
|---|
| Protein sequence | MLKIWMINQF ANTPDLPGHT RNYEVAKYLV KNGWRVDLFA SDFNLSQRKY CKLKKFELFK
INKIDGIKWH WLRVSSYSIN NWKRYLNILS FSIHIFLFLI LKSILSLKRE QLPNIILASS
PQLPAAYFCL IVSKILHIPL VLEIRDLWPQ ILIDLGDKSK ENILYRILYW MELLLYKESK
IIVILSKGSK EHVVKKGGKL IKWLPNGPDL SKFKFSSLPN EELTFSFNRP FRLVYAGAHS
QVNGLMYVLN AAKLLINHPI EITLIGDGPE KNNLVEQSKK LALNNVKFLK PHSKDNIPKI
LSTFDAILLS LIDSDLFRYG ISPNKLYDAY ALGRPVITTV PGMINDEVES NKLGTTSRAC
DSSSLSLAIK RLMNTSRRDR EMMGIRARSI AEKTYSRNRI NKEYDKLLRS LIPNE
|
|---|
| |