| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_08561 |
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| Symbol | rfbD |
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| ID | 4779279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | + |
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| Start bp | 785447 |
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| End bp | 786340 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640084131 |
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| Product | putative dTDP-4-dehydrorhamnose reductase |
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| Protein accession | YP_001014679 |
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| Protein GI | 124025563 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
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| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.001769 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAAGTTT TACTCACAGG AGCATCAGGA CAACTAGGGC AAGCAATCAT TAAATCAAAG
CCATCTTTTG TTGAGCTAAT AGCCACAACT CGACGTGAAC TCGATTTAGC TGATGATGAA
GCATGCCGTA GAGCAGTAAG ACAGCATCAG CCAGATTGGG TCATCAATAG TGGTGCATAT
ACAGCTGTAG ACAAGGCAGA AGACGAAAAA GAATTAGCAA TGAGTATTAA CACAATCGCT
CCAAAAATGT TTGCAGAGGA ATTGAGTCAA ACTGGAGGGA AGTTATTACA ACTAAGTACT
GATTTTGTAT TTGATGGGGA ACAAAATTTT CCATACAAAA CTGGTCAAAA GAAGAAACCC
TTGGGAGTTT ATGGAGCAAC TAAAGCAGCA GGTGAAGATG CTATTTACGA TGTACTAGGG
AATTCCAACC AAGCTTTGAT CATTCGAACG AGTTGGTTAT TTGGGGCTGT TGGAAAGAAT
TTCATGAAGA CGATGATTAG GCTACATCGG TCTCAAGAAG AAATTCGTGT CGTTTCAGAT
CAAATTGGTT GTCCAACAAG CACTTTGACA TTAGCTAAAG CATGCTGGAG GGCAATTGAG
AAACAAAAAG ATATTGAGCC AAACGTATTA TCTCCTCAAC TTCACCATTG GAGTGATGAA
GGCTCAGCAA GTTGGTATGA GTTTGCAAAG GTAATTGGTG AATTAGGTTG TAGGATAGGC
TTAATAGAAA GACCAGCCAA AGTTATACCA ATAAGTAGTG AGGAGTATAC GACACGTGCT
AAAAGACCTA AATATTCAAT TTTGGATTGT ACAACTACAA GACAATTTCT TAATCTTGAA
GGCATTCATT GGAAAGAGAG CATCCTCAAT GTGATGAAGC AAGTTTCAAC TTGA
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| Protein sequence | MKVLLTGASG QLGQAIIKSK PSFVELIATT RRELDLADDE ACRRAVRQHQ PDWVINSGAY
TAVDKAEDEK ELAMSINTIA PKMFAEELSQ TGGKLLQLST DFVFDGEQNF PYKTGQKKKP
LGVYGATKAA GEDAIYDVLG NSNQALIIRT SWLFGAVGKN FMKTMIRLHR SQEEIRVVSD
QIGCPTSTLT LAKACWRAIE KQKDIEPNVL SPQLHHWSDE GSASWYEFAK VIGELGCRIG
LIERPAKVIP ISSEEYTTRA KRPKYSILDC TTTRQFLNLE GIHWKESILN VMKQVST
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