Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_08251 |
Symbol | prkB |
ID | 4780086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | - |
Start bp | 758288 |
End bp | 759190 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640084100 |
Product | phosphoribulokinase |
Protein accession | YP_001014648 |
Protein GI | 124025532 |
COG category | [C] Energy production and conversion |
COG ID | [COG3954] Phosphoribulokinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.298725 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.584517 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAAGC TTCACCCAGT AGTAGCTGTA ACTGGTTCAT CCGGAGCAGG AACAAGCACC GTTAAAAGAG CATTTGAGCA TATATTTGCT CGGGAAAAGA TTGTTCCTGC AGTTGTTGAA GGAGATAGTT ATCACCGTTT TGAAAGAATG CCTATGAAAA AGGCAATGTC TGAGGCACTT TCAAGAGGTG AAAACTTTTC TCATTTTGGA CCAGAGGCAA ATTTATTCGA CAAATTAGAA GACCTATTCA GTCAATATGG AAAAACTGGC GGAGGTCAGA AAAGATATTA TTTACATAGC CCAGAAGAAG CCGAGGAACA TAACACTCGT TTAGGAACAA AATTAGATCC AGGTCAATTC ACTCCCTGGG AAGATATTCC AACAGGAACC GACCTTTTGT TTTACGAGGG ACTACACGGT GGAGTAGTAG GAAAAGATTA TGATGTGGCC TCATTCGCTG ATTTACTTGT TGGTGTAGTA CCAATTACTA ATCTCGAATG GATACAAAAA ATCCATAGAG ATAACGCAGA AAGGGGATAC TCAGCCGAAA CTATCGTAGA TACGATTCTG AGAAGAATGC CTGATTACAT TAATCACATA TGCCCCCAAT TCAGTCGAAC AGATATCAAC TTTCAGAGAG TACCTACAAT TGATACGTCA AACCCATTTA TTTGCAGGAA TATTCCAACA CCTGATGAAA GCTTTGTAAT TATTCATTTC AGAAAAGGTT CAAGAGAAAA ATGGGGAATT GACTTCCAGT ACTTATTAGG AATGATTCAC GATTCCTTCA TGTCAAGTCC TACAAGTATT GTTGTTAACG GAGGGAAAAT GGGATTTGCT ATGGAGCTTA TTCTTACACC TATTATTCAT AAAATGATAG AAGAGAAAAA GGCTTCAGGA TAA
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Protein sequence | MSKLHPVVAV TGSSGAGTST VKRAFEHIFA REKIVPAVVE GDSYHRFERM PMKKAMSEAL SRGENFSHFG PEANLFDKLE DLFSQYGKTG GGQKRYYLHS PEEAEEHNTR LGTKLDPGQF TPWEDIPTGT DLLFYEGLHG GVVGKDYDVA SFADLLVGVV PITNLEWIQK IHRDNAERGY SAETIVDTIL RRMPDYINHI CPQFSRTDIN FQRVPTIDTS NPFICRNIPT PDESFVIIHF RKGSREKWGI DFQYLLGMIH DSFMSSPTSI VVNGGKMGFA MELILTPIIH KMIEEKKASG
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