Gene NATL1_08011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_08011 
Symbol 
ID4779340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp737429 
End bp738154 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content34% 
IMG OID640084076 
ProductABC transporter ATP-binding protein 
Protein accessionYP_001014624 
Protein GI124025508 
COG category[R] General function prediction only 
COG ID[COG1137] ABC-type (unclassified) transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.969375 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCTAC TTATTGAGAG TTTGGATTTA ACCTTATCCA ATAAAACTAT TGTAAAAAAC 
GTCGATTTAA TTGTTAAGCC TGGGGAAGTG GTTGGTCTTT TGGGACCAAA TGGTGCGGGT
AAAACTAGTA CTTTTAATTT GATCATGGGC TTGATTAAGC CAAACAAAGG AAATATCTAT
TTGGAAGGGA ATAGTATAAA AAAATTTTCG ATGACAAAAA GAGTTCAATT AGGGATAGGT
TATTTACCTC AAGAACCAAG TGTTTTTAGA AATCTTACAG TTATTGAGAA TTTGGATATT
GCTCTTTCTC AAGCTAAATT ATCAATTTCT TTGTTTAGGA AAAAACGTGA AGAATTGATT
GAGGAATTTA ATTTGGCCTC TTTCCTTGAT CGCTTTGGTC ATCAACTTTC TGGTGGAGAA
AGACGCAGAT GTGAAGTTGC TAGAGCTTTG GCTGTGGGAC GATTGGGTCC AAAATTTCTA
CTCTTAGATG AGCCTTTTGC AGGAGTTGAT CCTATTGCTA TTAATGATCT ACAGAATTTA
ATTAGGAAAT TAAAAAATAA GAGTATAGGC ATATTAATTA CCGATCACAA TGTTAGAGCA
ACTTTGGCCA TAACAGAACG TTCTTATATT CTTAATCAAG GCGAAATCCT TGCTGATGGA
ACGTCTGATC AACTAACAAA GAATCAAATT GTTAAAGATA GCTATCTGGG GAATTCATTC
GATTAA
 
Protein sequence
MTLLIESLDL TLSNKTIVKN VDLIVKPGEV VGLLGPNGAG KTSTFNLIMG LIKPNKGNIY 
LEGNSIKKFS MTKRVQLGIG YLPQEPSVFR NLTVIENLDI ALSQAKLSIS LFRKKREELI
EEFNLASFLD RFGHQLSGGE RRRCEVARAL AVGRLGPKFL LLDEPFAGVD PIAINDLQNL
IRKLKNKSIG ILITDHNVRA TLAITERSYI LNQGEILADG TSDQLTKNQI VKDSYLGNSF
D