| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_07931 |
|---|
| Symbol | ddpX |
|---|
| ID | 4780304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | + |
|---|
| Start bp | 725932 |
|---|
| End bp | 726687 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640084068 |
|---|
| Product | D-ala-D-ala dipeptidase |
|---|
| Protein accession | YP_001014616 |
|---|
| Protein GI | 124025500 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2173] D-alanyl-D-alanine dipeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTAA GACCTTGGAA TAATATAAAA ATAAATGAAT GTAATGAGCC TTTAATTGTT
ATCCCTGAAT CCATATTTCG ACTAACACCT CATCCTTATA TGTCGTTAGG TGCACCATAT
TTAACTGGAC TAGATCCGTG GTTTTTACGC CAAAGTGTCT TAAAAAGATT GAAACAAGCA
CAACAAAATC TTTTTGATAT TACTTCCGAT TTACAGTTGG CTTTGTTTGA TGCTTGGAGA
CCTATCTCTG TACAGAAATT CATGTTTAAT TACACTATTG AAGAAACTTG TAGGTCGAGG
GGGATAAATA TTGATGATAT CTCAAATAAA GAAGATATCA CTGACGTGAT TGAGGAGGTT
GGTCGATTCT GGGCAAAACC TTCATGTAAT CCTCTTACAC CTCCTCCTCA TAGTACTGGT
GCTGCAATAG ATTTGACTCT TGCTGATATG ACTGGACATC AATTGGATCT TGGAGGAGAA
ATAGATTTTA TTGGTCCTGA ATCAAGTCCT GACTTTTATC AGAAAGACAA TTTAGGGATG
CCTTGTTCAA AACATCAAGT TTTTCATAAC AGAAGATCTC TTTTATCTTC AGTTATGGAA
CAGGCTGGAT TTGTTCAACA CCCAAACGAG TGGTGGCATT TTAGCTATGG AGATCAATTA
TGGGCTTGGA CTAGCAATCA AGGTATTCCT ATTTATGGAG CTGCACTTGA AGTAAGTAAA
GACATTACAC TTTCAGAACC AAGTTTAGTC ACATGA
|
|---|
| Protein sequence | MNLRPWNNIK INECNEPLIV IPESIFRLTP HPYMSLGAPY LTGLDPWFLR QSVLKRLKQA
QQNLFDITSD LQLALFDAWR PISVQKFMFN YTIEETCRSR GINIDDISNK EDITDVIEEV
GRFWAKPSCN PLTPPPHSTG AAIDLTLADM TGHQLDLGGE IDFIGPESSP DFYQKDNLGM
PCSKHQVFHN RRSLLSSVME QAGFVQHPNE WWHFSYGDQL WAWTSNQGIP IYGAALEVSK
DITLSEPSLV T
|
|---|
| |