Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_07901 |
Symbol | tsf |
ID | 4779979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | + |
Start bp | 721457 |
End bp | 722113 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640084065 |
Product | elongation factor Ts |
Protein accession | YP_001014613 |
Protein GI | 124025497 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0264] Translation elongation factor Ts |
TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.987366 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGAAA TAACAGCTAA ACTCGTTAAA GAACTGCGAG ATAAGACATC TGCAGGAATG ATGGATTGTA AAAAAGCCCT TATTGAAAAT AAGGGTGATA TGGATAAGTC TATTGAGTGG TTAAGACAAA AAGGCATTGC CAGCGCTGAA AAGAAATCAG GTAGAGTTGC TGCTGAGGGC GCTGTAGGAA GTTACATTCA TACAGGTTCT CGTGTAGGTG TTCTTCTGGA GCTGAACTGC GAGACTGATT TTGTTGCTAG AGGTGATTTA TTCCAAGGCC TTTTGAGAGA CTTATCAATG CAAGTGGCCG CTTGTCCAAG TGTTGAATAT GTAAGTGTTG ATCAAATTCC AGAATCAATT GCCAACAAAG AGAAAGAAAT AGAAATGGGA AGAGATGACC TCTCTGGTAA GCCTGATCAA ATAAAAGCTA AAATCGTTGA AGGAAGAATA GGTAAGAGAT TGAAAGAAAT GGCTCTTTTA GAACAGCCAT TCATAAAAGA TAGTTCAATA AATGTTGAAG AGTTGGTAAA ACAAGTTGCT GGAAAAATTG GCGAAAATAT AAGAGTTCGT AGATTTACCA GATATATACT TGGAGAGGGG ATTGAGGTTC AAGGACCTGA CTTCGCAGAA GAGGTCGCAT CTATGACTTT AGGTTGA
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Protein sequence | MAEITAKLVK ELRDKTSAGM MDCKKALIEN KGDMDKSIEW LRQKGIASAE KKSGRVAAEG AVGSYIHTGS RVGVLLELNC ETDFVARGDL FQGLLRDLSM QVAACPSVEY VSVDQIPESI ANKEKEIEMG RDDLSGKPDQ IKAKIVEGRI GKRLKEMALL EQPFIKDSSI NVEELVKQVA GKIGENIRVR RFTRYILGEG IEVQGPDFAE EVASMTLG
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