| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_07781 |
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| Symbol | lspA |
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| ID | 4780795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | - |
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| Start bp | 711608 |
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| End bp | 712144 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 640084053 |
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| Product | lipoprotein signal peptidase |
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| Protein accession | YP_001014601 |
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| Protein GI | 124025485 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.246414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0597023 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTAGCA ATAAGTCTAT TATCTATATT CTTAAGAAGA GTCTTAATAA TAAAATGACT
TTAATTAACA GAAAAAGTAT TAATGTCATC ACTTACTCTT TTTACATTGT TTTATTAGAT
CAAGTCAGTA AGTTCTTGAT ATTAAATACA TTAGGATTTG AAAGATCTCA AAATATTATT
CCTAATTTAT TAAATTTCAC CCTAGTAAAA AACAGAGGAG CTGCATTTAG TCTTCTAAGC
AATTCCACAA GCCTTCTTAC TATTATAAGT ATTCTGGCCT CATTATTATT AATCACCGTT
ATAATAAGAT TTCCGCCAAG ATCTTATTGG AATTTGAATG GACTTGCCTA TCTTTTAGGT
GGTACTTTAG GTAATGGAAT TGATAGATTA TTCAAAGGTT ACGTTCTTGA TTTTTTAGAT
CTTGTTCCAA TTAATTTCCC TATTTTTAAC GTAGCAGATA TAGCAATAAA CATTGCTATA
TTTTGTTTTA TAATTGATAT AATTAAAACT CAAGACAAGT CAAAATTAAA GTATTAA
|
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| Protein sequence | MRSNKSIIYI LKKSLNNKMT LINRKSINVI TYSFYIVLLD QVSKFLILNT LGFERSQNII
PNLLNFTLVK NRGAAFSLLS NSTSLLTIIS ILASLLLITV IIRFPPRSYW NLNGLAYLLG
GTLGNGIDRL FKGYVLDFLD LVPINFPIFN VADIAINIAI FCFIIDIIKT QDKSKLKY
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