Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_07361 |
Symbol | |
ID | 4781250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | + |
Start bp | 677452 |
End bp | 678756 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640084011 |
Product | carboxyl-terminal processing protease |
Protein accession | YP_001014559 |
Protein GI | 124025443 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00775451 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTGAAGA GATTTTTAAA AATATGTTTA CTTATAGCTA TTTGCCCTTC ACCTTCTTTC TCTTTCCAGG CTAATTCCTC TACTTTGATT ACTAACAATC CAAAGGAGAT TATTGATCAG GTATGGCAAA TTATATATCG CGACTTTTTG GACTATTCAG GAAAATATAA GGCAGAAGAT TGGATTAAAT TAAGAAAGGA AATACTATCA ACCAAATATT TTGATAATGA CGAAGCATAC ATTGCCATTA AAGATATGTT GACAGAATTA GATGATCCTT ATACCAGATT TTTAGATCCT AAAGAATTCA ATGAAATGAG AATAGATACA ACGGGAGAAT TGATGGGAGT AGGTATTCAA ATTTCTCTAG ATGAAGTTAG TAATCAAATT GTTGTCGTAT CACCAATAGA GGGAACCCCA GCCTTTCTCG CGGGAATTAA ACCGAAGGAT ATAATTGTAT CTATAGATGG TAAGGCTATC GATGGTCTGA GCATAGACAG TACTGTTAAA CTTATTCGAG GTAAAAAAGG AACGAAGGTT GAACTAGGTA TTATTAGAGA CGAGGAGTTA TTAAATATCT CATTAATACG AGATAGAATT GAAATTAATG TTGTTGATAG TCGAATAAAT AATACAGTTT CAGGCGCGAA AATTGGTTAT GTAAGGTTAA AACAATTTAA TGCCAAATCT CCAAAAGAAA TGAGTTTATC TATTAATAAA TTAGAAAAAC AACAACCTTT TGGTTATGTA TTAGACCTTA GAAGTAATCC TGGTGGTTTG CTTGAGGCAA GTATTGAAAT AGCGAGACAA TGGATAAATA CAGGAATTAT TGTTAGTACT AAAACAAAAG ATGGTATTAC TGATATTCGG AAAGCAAAAA GTAGAGCCTT AACTAACAGA CCAGTTGTGG TTTTAATCGA TGAAGGATCT GCGAGTGCTA GTGAGATTCT CTCTGGAGCA ATTAAAGATA ATAAAAGAGG AGTATTGGTT GGGAAAAAGA CTTTTGGTAA AGGACTAGTT CAGTCTGTCA GGTCTCTTTC TGATGGCTCA GGTCTAACAG TTACGGTCGC AAAATATTTA ACACCAAGTG GTAAAGATAT TAATAAAAAT GGAATAGCAC CAGATATCAG AGCAGATCTT TTGTTAAATG AAAAAAACAA ATTAACAAAT GCAGATCTAG GAACTTTAAA AGATAGTCAA TATGTTGCGG CTGAAAATAT ATTACTTAAA AAGTTTAAAA TTGAGAGTAA TAAAAATTCT TATAATCCCT TGAAATCAAA TTTGGGCTAT GCCCTAAAAA ACTAG
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Protein sequence | MLKRFLKICL LIAICPSPSF SFQANSSTLI TNNPKEIIDQ VWQIIYRDFL DYSGKYKAED WIKLRKEILS TKYFDNDEAY IAIKDMLTEL DDPYTRFLDP KEFNEMRIDT TGELMGVGIQ ISLDEVSNQI VVVSPIEGTP AFLAGIKPKD IIVSIDGKAI DGLSIDSTVK LIRGKKGTKV ELGIIRDEEL LNISLIRDRI EINVVDSRIN NTVSGAKIGY VRLKQFNAKS PKEMSLSINK LEKQQPFGYV LDLRSNPGGL LEASIEIARQ WINTGIIVST KTKDGITDIR KAKSRALTNR PVVVLIDEGS ASASEILSGA IKDNKRGVLV GKKTFGKGLV QSVRSLSDGS GLTVTVAKYL TPSGKDINKN GIAPDIRADL LLNEKNKLTN ADLGTLKDSQ YVAAENILLK KFKIESNKNS YNPLKSNLGY ALKN
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