| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_07341 |
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| Symbol | ispG |
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| ID | 4780409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | + |
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| Start bp | 676176 |
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| End bp | 677399 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640084009 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_001014557 |
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| Protein GI | 124025441 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00679645 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTGCGA CCCTAGAAAA AAATATGGAA GGAAATAATC TCTCTCAGCG ATATAGCACC
AGAATTATTC GTAGAGATAC TAGGCCAGTA ATGGTCGGTG ATATTGGCAT CGGTGGAGAT
AATCCAGTGC GTGTTCAATC AATGATTAAT GAAGATACGA TGGATATCGA GGGTTCAACG
GCCGCAATAA GGAGATTGCA TGAAGTTGGA TGTGAGATCG TCAGATTAAC AGTGCCAACT
CTTGCAAGTG CAAAAGCTGT GGGGGAAATC AAGAAACTTC TAGCTAGCAC TTATCAACCA
GTTCCTTTAG TAGCCGATGT TCATCATAAT GGAATGAAAA TAGCCTTAGA AGTAGCTAAG
CATGTAGATA AAGTTCGTAT CAACCCTGGA TTATTCGTTT TTGAAAAACC TGATCCAAAT
AGAACTGAAT TTACTAAAGA TGAAATTGAT GTAATTAAAG AGAAGATCAT ACAAAAATTC
AAACCAATTG TTAATACTTT AAAAGAGCAA AATAAGGCAC TCAGAATAGG CGTTAACCAT
GGATCTTTGT CTGAAAGAAT GTTATTTGCT TATGGAGATA CTCCATTTGG AATGGTTGAA
TCAGCTATGG AATTTATTCG AATATGTCAT TCATTAGATT TTCATAATAT TGTAATTTCG
ATGAAGGCTT CTCGAGCTCC CGTGATGCTT GCAGCTTATA GAATGATGGC TGACACAATG
GACAAAGAGG GATTTAATTA TCCTCTGCAT TTAGGTGTAA CGGAAGCGGG AGACGGGGAT
TATGGAAGAA TTAAAAGTAC GGTAGGGATA GGGACATTAT TATCCGAAGG TATTGGAGAT
ACCATTAGAG TTTCTTTAAC AGAGGCGCCC GAAAAAGAAA TACCAGTTGC ATATTCAATT
TTACAAGCGG TTGGTTTGAG AAAAACCATG GTTGAATATA TTAGTTGTCC TAGTTGTGGT
AGAACATTAT TTAATTTAGA GGAAGTTGTA GCAAGAGTTA GAGACGCTAC TCAACATTTA
ACCGGTTTGG ATATTGCTGT AATGGGTTGC ATCGTTAATG GGCCTGGAGA GATGGCAGAT
GCTGATTATG GTTATGTAGG AAAAGGTGTT GGAACCATTG CTCTTTATAG GAATAGAGAT
GAAATTAAGA GGGTACCTGA GGATGAAGGC GTTCAGGCAT TGGTTGATTT AATTAAAGAG
GATGGTAAAT GGGTAGATCC TTAA
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| Protein sequence | MIATLEKNME GNNLSQRYST RIIRRDTRPV MVGDIGIGGD NPVRVQSMIN EDTMDIEGST
AAIRRLHEVG CEIVRLTVPT LASAKAVGEI KKLLASTYQP VPLVADVHHN GMKIALEVAK
HVDKVRINPG LFVFEKPDPN RTEFTKDEID VIKEKIIQKF KPIVNTLKEQ NKALRIGVNH
GSLSERMLFA YGDTPFGMVE SAMEFIRICH SLDFHNIVIS MKASRAPVML AAYRMMADTM
DKEGFNYPLH LGVTEAGDGD YGRIKSTVGI GTLLSEGIGD TIRVSLTEAP EKEIPVAYSI
LQAVGLRKTM VEYISCPSCG RTLFNLEEVV ARVRDATQHL TGLDIAVMGC IVNGPGEMAD
ADYGYVGKGV GTIALYRNRD EIKRVPEDEG VQALVDLIKE DGKWVDP
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