| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_07291 |
|---|
| Symbol | |
|---|
| ID | 4780278 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | - |
|---|
| Start bp | 672232 |
|---|
| End bp | 672966 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640084004 |
|---|
| Product | putative phosphonate ABC transporter |
|---|
| Protein accession | YP_001014552 |
|---|
| Protein GI | 124025436 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3638] ABC-type phosphate/phosphonate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.305194 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00460957 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGACTAAGT TACTAGAATT AAAGAATATA AACCATAGGA GTAAAGAAAG CATTAGAGTA
AAAGATATTA ATTTAACAAT AAATCAAGGT GAGAAGATAG CGCTTATCGG CAAAAGTGGC
TCTGGCAAAA GTACATTAAT CTCGATCGCG AATGGATCAC TAATCCCGAA CGAAGGAGAT
GTAATATGGA AAGGTTTTCA CATTAACAAT CTCTCAAATA TTGAGTACTC AAAAATAGGA
ACTATATGGC AGAATTTATC TTTGATAGAA GAGCTAAATG TCGCTCAGAA TATAAACTGC
GGTGCATTAG GTAAACACAA TTTCATATGG GCTTTAAAAA ATCTCCTAGG AGTCATAGAT
AAAGGTTTAT GCCAAGACTG CCTAGCAGCA GTCTCTCTCC CAAAAAAAAC TATTTATTCC
TATGTAAATA AACTTTCTGG TGGTCAAAAA AAAAGAATAG CAATTGCACG TCTTTTAAGA
CAAGAACCAG AGATCTTGCT TGGAGACGAA CCTTTCTCAA ATTTAGACCC TCTATTATCA
AAAAATATCT TAAATTTATT TATTAACCAA AAAAATTATC TTAGAATTAA AATTCCTGAG
ACCATACTTA TAAGTCTTCA CCAAATTCAT TTAATAAATA ATTTCAATAG AGTTATTGGG
TTAAAAGATG GAGAGATTGT AATAGATAGA GAAATTCATA ATATTAATCA ATCAGAGCTT
GATTGGCTAT TTTAA
|
|---|
| Protein sequence | MTKLLELKNI NHRSKESIRV KDINLTINQG EKIALIGKSG SGKSTLISIA NGSLIPNEGD
VIWKGFHINN LSNIEYSKIG TIWQNLSLIE ELNVAQNINC GALGKHNFIW ALKNLLGVID
KGLCQDCLAA VSLPKKTIYS YVNKLSGGQK KRIAIARLLR QEPEILLGDE PFSNLDPLLS
KNILNLFINQ KNYLRIKIPE TILISLHQIH LINNFNRVIG LKDGEIVIDR EIHNINQSEL
DWLF
|
|---|
| |