Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_07251 |
Symbol | |
ID | 4781287 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | + |
Start bp | 668425 |
End bp | 669189 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640084000 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_001014548 |
Protein GI | 124025432 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0041784 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTGAGA AAAGAAGATT ATTTATAAAA CTAAATCGAT TAAGAGATGA AATCGATTCA AATGGAGAGT TGAAATTGAC CTCTAATGAA TCACATTATT TATTCAGGGT TATGCGGATG AGATCGGAAG ATCTTTTAGA AGTCATTGAT GGAAAAGGTC GTCTTTGGAA CGCAAAAATT GTTGAAAAAA AAGCTATAAA ACTTACCAAT GGTTTTGATA AGCCTCTTCA ATTCGTTTCA AGAGAAAGAC CATTAATAGG AATTGCCATA GTTATTCCTA AAAAGGGGTT TGAAAACTTT TTGCAAATGA GTTGTGAGAT AGGAGTTGAT ATTATTCAAC CATTAATCTC AAAACGATCA GTAGTTAAAG AATGCAGTAA CGAAAAAATT ATTAGATATA AAAAAATTAT TTATGAAGCC GTTGAGCAAT CCGAAAGACT CTGGAGTCCA GAATTAATGC AGGTATTAAC ATTTCCCAAT TGGATAAATG ATATGTCTTC GGAAGCTCAA GTCGGATTTG CGGCAACACG TATTGAAGAC TTGCCAGATT GTGTGACTTG GGTAAAAGAA ACACCACATG AAGTCAATCA AGTTTGGGTG GTAATTGGAC CAGAGGGAGG ATGGAATAAA GAAGAAGAGG AATTAGCTTT TAACGCTGGA TTCGTTGGGG TGTCTATGGG AGAAACTATT TTGAGGACAT CAACAGCTGC CGTAAGTGCC TTACAAGTAA TGACTTCATG GAGAAGACTT AAATCATCCT TTTAA
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Protein sequence | MAEKRRLFIK LNRLRDEIDS NGELKLTSNE SHYLFRVMRM RSEDLLEVID GKGRLWNAKI VEKKAIKLTN GFDKPLQFVS RERPLIGIAI VIPKKGFENF LQMSCEIGVD IIQPLISKRS VVKECSNEKI IRYKKIIYEA VEQSERLWSP ELMQVLTFPN WINDMSSEAQ VGFAATRIED LPDCVTWVKE TPHEVNQVWV VIGPEGGWNK EEEELAFNAG FVGVSMGETI LRTSTAAVSA LQVMTSWRRL KSSF
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