| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_07201 |
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| Symbol | prfC |
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| ID | 4781061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | + |
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| Start bp | 663894 |
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| End bp | 665561 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640083995 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_001014543 |
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| Protein GI | 124025427 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.577625 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0107792 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATCAA CTCCCCAAGA CAAGACTAAT TTAGATCCAA ATTTAGTAGA AGAATTAACT
GTATCTTTAA GTAAAGAGGT TAGTAAAAGA AGAAATTTTG CGATTATTTC CCACCCTGAT
GCAGGGAAAA CTACTTTGAC AGAAAAACTT TTACTTTATG GCGGAGCTAT TCAACAGGCA
GGAGCAGTAA AAGCAAGAGG AGAACAGAGA AAAGTTACTT CTGATTGGAT GGAGCTTGAA
AAACAACGAG GCATATCAAT TACATCAACT GTTTTACAAT TTGCTTATAA AGATAAGACG
ATAAATTTAT TAGATACCCC TGGCCACCAA GACTTCTCGG AAGATACGTA TAGGACACTT
GCCGCTGCTG ATAATGCTGT AATGCTTGAG GATGCAGCAA AAGGTCTTGA ACCTCAAACA
AGGAAGCTTT TTGAGGTTTG CAGAATGCGT CAGATACCAA TTTTTACATT CATCAACAAG
ATGGATAGGC CAGGTCAAGA ACCGCTGGAA TTATTAGATG AGATTGAGTC TGAATTAGGG
TTATTGACCT TTGCAGTTAA TTGGCCAATA GGGAGTGGTG AGCTTTTTAG AGGTGTTGTT
GAGCGTGCTA CCAAAGAAGT TGTTCTATTT TCTAGAGCGG AAAGAGGGAA GCAATCTAAT
GAAATAAGGT TAAAAATCAA TGATCCTGAA CTTAAAAACT TAGTCGAAGA AGAGCTATTG
ACAAAAGCAC TTGAAGAGAT TGAGATCCTA GATGAGGCTG GTTGTGACTT AAATCAAGAA
TTAATCTTGT CTGGCGAATT AACTCCTGTG TTTTTTGGAT CTGCAATGAC CAACTTCGGG
GTTAGGCCAT TTTTAGATAA TTTTCTTGAT CTTTCTCAGG GACCTGTCGC TCGAAATAGC
TTTGATGGAC CAATCGTTCC TACAAGAGAA TCATTTAGTG GATTTGTATT TAAATTACAA
GCAAATATGG ATCCAAAACA TAGGGATAGA GTTGCTTTCG TGCGTGTATG TAGCGGGAGG
TTTGAAAAAG ATATGACAGT TCAACACGCC AGGACAGGTA AACAAATCAG ACTCTCAAGA
CCCCAAAAGA TTTTCGGTCA AGATAGGGCT GTTGTTGATG ATGCTTATCC TGGGGATGTT
ATTGGTTTGA ATAATCCGGG GATGTTTTCT ATTGGAGATA CTTTATTTAT TGGTCCGAGA
GTCGAATTCG AGGGCATCCC ATGTTTTAGC CCCGAGATAT TTAGTTGGTT AAGAAATCCA
AATCCTTCAG CTTTTAAAAA CTTTAGGAAA GGGGTCAATG AATTAAGAGA GGAGGGAGCA
GTCCAAATTC TTTACGATAA AGATCAAAGC AAAAGAGATC CAATTTTGGC CGCAGTTGGT
CAGCTTCAGC TTGAGGTGGT ACAGCATCGA CTTGCTAGTG AATATGGGGT GGAAACTCGG
CTTGAACCAA TGGGTTATCA AGTCGCCAGA TGGGTAAAAG GGGGATGGCC TGCTTTGGAC
GAGGTTGGAA GAATTTTTAA TTGCAAAACC GTTCAAGATG CTTGGCTTAG ACCAGTACTG
CTTTTTAAAA ATGAATGGAA TCTTAATCAG TTAAAGGAAG ATCATCCTGA AATGGAATTA
AACTCAGTTG CTCCGGTTGT TAGTGGTGTT GATCCTGTTT CTCTCTAA
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| Protein sequence | MKSTPQDKTN LDPNLVEELT VSLSKEVSKR RNFAIISHPD AGKTTLTEKL LLYGGAIQQA
GAVKARGEQR KVTSDWMELE KQRGISITST VLQFAYKDKT INLLDTPGHQ DFSEDTYRTL
AAADNAVMLE DAAKGLEPQT RKLFEVCRMR QIPIFTFINK MDRPGQEPLE LLDEIESELG
LLTFAVNWPI GSGELFRGVV ERATKEVVLF SRAERGKQSN EIRLKINDPE LKNLVEEELL
TKALEEIEIL DEAGCDLNQE LILSGELTPV FFGSAMTNFG VRPFLDNFLD LSQGPVARNS
FDGPIVPTRE SFSGFVFKLQ ANMDPKHRDR VAFVRVCSGR FEKDMTVQHA RTGKQIRLSR
PQKIFGQDRA VVDDAYPGDV IGLNNPGMFS IGDTLFIGPR VEFEGIPCFS PEIFSWLRNP
NPSAFKNFRK GVNELREEGA VQILYDKDQS KRDPILAAVG QLQLEVVQHR LASEYGVETR
LEPMGYQVAR WVKGGWPALD EVGRIFNCKT VQDAWLRPVL LFKNEWNLNQ LKEDHPEMEL
NSVAPVVSGV DPVSL
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