| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_07141 |
|---|
| Symbol | |
|---|
| ID | 4781234 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | + |
|---|
| Start bp | 657132 |
|---|
| End bp | 659228 |
|---|
| Gene Length | 2097 bp |
|---|
| Protein Length | 698 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640083988 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001014537 |
|---|
| Protein GI | 124025421 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.340212 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.245946 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTATTA AGAAAAATAT TAATCACTCT AAATATATTT TTTGGATTTC AATTTTATTT
ATATGGATTC TTTCGACCAT AATTGACCGT ATCTGGTGGA ATTTATATAG CATTACTCCT
TCATGGGATC AGGCTGACTA TCTCAATAGT GCCCTTGACC ATGGCCGTGC ACTCTCTTTT
TTGGGAGCAG ATGGAGCTTC AGACTTTAAT TCTTTACTAG ATAAATCGCC AAAAATTCCT
CCTTTGGCTT CAATAATCAA TGGAGCCGTA ATTACCTTTG CTGGTGATGC TCCTCATCAG
GCGGCCTGGT CCTTAAGTTT TTGGAATGGA TTCTTTATCT TTAATATTGC TTCGTGGGGA
CTTTATTTGA GTGGGAAAAA ACTTGGACTT TTTTGTGTTC TTATCAGTGC ATTTTCTCCT
TTCTTATTTA ATCTAAGAAC TGATTATGTA TTGGAGTTAC CTTTAATTTC CGCTATTACA
TTTTATTTGT TTCATCTAGG AAGGTGGAGT GATAAATCAA TCGGAGGTAA ATGGATTCAA
TTGATAATTG CTACTTTCGC ATGCTCTTTT TCTTTATTGA TTAAGCAAAG TTCTTTATTA
GTTATCATAC CTTCTTTATT ATTTGTTTTT GTGCTTTCTT TTAAAAGAGA TAAAAAATTT
CGATTACAAT TTTTATGCTT AGTTCTTATA AATATTTTAG CAATTTTACC TTGGTTTTTT
CACAATTGGA TAATGATATT AAGTGGAACT TATAGAGCTG TTTTTGAATC GGCGGCGATA
GAAGGTGATC CTTCTATTTT AGGTTTTAAA AGTATTTTCT GGTATTTTCC ATATTTAGAT
AATCAGTTTG GAATTATTAT TTTCGTTTTT GGATTGTCAG GAATACTATT TGCATTTTTA
ACCTATTTAA GATCTTTTAG ATCTCAAGCA AGATTAGTTG ATATTTTTAA TGAGAATAAT
TATAAATGGA CATGGATTTA TTTTAATTTA ATAACATGCT GGACTTTTAC AACTTTCATT
CCTAACAAGG ATGAAAGATA TATAGCATGT ACAATCCCGT TAATTATTTT ACTGCTAGGC
TTTGGATTTA CTAAGTGGAG TGATTGGCTA GGTACTTATT CTAAATTAAA CTCTTATATT
TTATTATTTA TTCCTGCTGT AAGTTTTCTA TTTTCCAATT CTATTAATAA GTTTAACGCT
CTACAAAATA TTACAAGTAA ATATTATCCT GTTAAAGATA TTTTATCGAT AGTTAGATCT
GATCAGTCTA TCGATAAAAA AGAAACAGTT ATTGTTGTTC CAAGCACCCC TGAAATTAAT
CAGCATAATG TAAGCTATTT TGGAAGAATG CAAGGTGGAA ATATTTTAGG CAGACAACTT
GGGCAATCTC TTTTGCATAT AGAACCAGTG CTTAAATACT CTAATTGGAT TATTTTGGCA
GACGGAGATC AAGGCTCAGT TCCAAGTAAT TCACTAGTTC TAGACAAAGC GATTAGAGAT
AGTTCTCTTT TTATACAAGT TCAAGAATTT CCTAGAGAAC AAGAGGGAAG CTATTCTCTT
TGGAAGCGAA GATCAAGTTC ATTTAATCCA AATGAATTTC ATAATAGATT TATTGAACTA
GCAAAGGGGA TGGAGAAAGG TCCATTAGGT ATTAAATTGA TTTTTGATGA AATAGAAATA
GAACATATGC TTGATGGGCA TTTGAAATAT CAAAGTATAG TTAGAGATAA GGCATTATCC
AAAATAAGTT CAGACCCTGA AAATGTTGAA TCTTTATGGT CCTTATCGCT TTTGAAGATA
TTATCGAATA GACCTTATGA AGCTGATATT TATTTAAGAA ATTTAGAAAT CTTGTTGCCA
AATAATCCTT GGCCAAGTGC TTATAGAATA ATAGTTAACT TTGCCTCTTG GAATCCTTGG
AAGGCCTCCT TAATAGCCGA TAAGGCTAAT AAAAGAAATC CAAATTACTT TCTAAAAAGT
TTGAGTGATA TAAGTGCAAT TTTCAGGGGA TCCTTTTGGA GAATAAAGTC TGCTTTAAAT
AGTGTTCCGA ATGCAATAAA AAGTGTTGAT GAATCTCTAA AACCAATAGA AAAATAG
|
|---|
| Protein sequence | MLIKKNINHS KYIFWISILF IWILSTIIDR IWWNLYSITP SWDQADYLNS ALDHGRALSF
LGADGASDFN SLLDKSPKIP PLASIINGAV ITFAGDAPHQ AAWSLSFWNG FFIFNIASWG
LYLSGKKLGL FCVLISAFSP FLFNLRTDYV LELPLISAIT FYLFHLGRWS DKSIGGKWIQ
LIIATFACSF SLLIKQSSLL VIIPSLLFVF VLSFKRDKKF RLQFLCLVLI NILAILPWFF
HNWIMILSGT YRAVFESAAI EGDPSILGFK SIFWYFPYLD NQFGIIIFVF GLSGILFAFL
TYLRSFRSQA RLVDIFNENN YKWTWIYFNL ITCWTFTTFI PNKDERYIAC TIPLIILLLG
FGFTKWSDWL GTYSKLNSYI LLFIPAVSFL FSNSINKFNA LQNITSKYYP VKDILSIVRS
DQSIDKKETV IVVPSTPEIN QHNVSYFGRM QGGNILGRQL GQSLLHIEPV LKYSNWIILA
DGDQGSVPSN SLVLDKAIRD SSLFIQVQEF PREQEGSYSL WKRRSSSFNP NEFHNRFIEL
AKGMEKGPLG IKLIFDEIEI EHMLDGHLKY QSIVRDKALS KISSDPENVE SLWSLSLLKI
LSNRPYEADI YLRNLEILLP NNPWPSAYRI IVNFASWNPW KASLIADKAN KRNPNYFLKS
LSDISAIFRG SFWRIKSALN SVPNAIKSVD ESLKPIEK
|
|---|
| |