| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_06981 |
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| Symbol | mscS |
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| ID | 4780755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | - |
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| Start bp | 641148 |
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| End bp | 642164 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640083974 |
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| Product | small mechanosensitive ion channel |
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| Protein accession | YP_001014523 |
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| Protein GI | 124025407 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.247932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGATT TTTATAAAAA CATAATCATT TCATTACTTA CTTTTAGCGT TGGTTTCATT
ATTTCCTTGG TGAGTCCAAA AATCCTAAAA AAGGTTTTAA GGAGAATAAC CTCTACTACT
AAAAGCAAGA CTGATGACTA TATAGCTATT CTTTTAATTG AGACTATTAA ACCTTTAGGG
TTTATCTTAA GTTTCATAGT TGCATGGAAA GTCTTACTAA TTGGTGGAAT AGTTGATAAG
ACATTAATTG GTATTAGTAA GTTTCTATGC CTTATTTATA TTGTCAGATT TATAAATAGA
GTATTTTTAA AAATAATACA AAGATGGGCA AGCAAAATCA ACGATCAATC TATCAGTGAA
ATGATTCGTT CACTTAGTCC AATGGTTGGG GCATCTGTTT GGAGTCTAGG AGTTATTTTT
TATCTTCAAA ATATGGGAGT CCAAATGGCA GCCATTTGGG CTCTTTTAAG TGCAGGAGGT
ATAGGAGCTG GACTTGCATT AAAGGAACCA GTTCAAGAGT TCTTCGAATA CATAACGATC
CTCCTAGATA AACCATTTCA AAGTGGACAG TTCATTCATA TTGATGGGAT CTGGGCAAAA
GTTGAGAGAG TAGGTGTTAG ATCAACACGC TTAAGAAGTA TTAACGGAGA AGCAATAGTA
ATGAGCAATA GCCGACTCAC AAATGGAGTA ATCTCAAATT ATGCTGAGAT GAAAAAAAGA
AGACTGGTTC ATAAATTAGG TGTGGTCTAT GAAACTACAT ATGAACAAAC AAAAAGCATA
CCTGTGATGA TAAAAAATAT TGTTGATAAA ACTGAAAATG CGATCTTCGA CCGATGTCAT
TTTATCGAAT TCGCAAATAG CAGTCTTGAT TTTGAACTAG TCTATTACAT CCCTACAAGT
GATTATCTTC TAGCAATGTC AGCTCAGCAA GAAATTAATC TAGAGATCAT GAAGAAATTC
CAAAATGAAA ATATTAACTT CGCATATCCA ACCCAAACAA TTCATATAAA TAAATAA
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| Protein sequence | MDDFYKNIII SLLTFSVGFI ISLVSPKILK KVLRRITSTT KSKTDDYIAI LLIETIKPLG
FILSFIVAWK VLLIGGIVDK TLIGISKFLC LIYIVRFINR VFLKIIQRWA SKINDQSISE
MIRSLSPMVG ASVWSLGVIF YLQNMGVQMA AIWALLSAGG IGAGLALKEP VQEFFEYITI
LLDKPFQSGQ FIHIDGIWAK VERVGVRSTR LRSINGEAIV MSNSRLTNGV ISNYAEMKKR
RLVHKLGVVY ETTYEQTKSI PVMIKNIVDK TENAIFDRCH FIEFANSSLD FELVYYIPTS
DYLLAMSAQQ EINLEIMKKF QNENINFAYP TQTIHINK
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