Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_06821 |
Symbol | hisS |
ID | 4779732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | + |
Start bp | 628611 |
End bp | 629882 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640083958 |
Product | histidyl-tRNA synthetase |
Protein accession | YP_001014507 |
Protein GI | 124025391 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0124] Histidyl-tRNA synthetase |
TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.254744 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACCAATC TCAAGAATTT AAGGGGAATG TTGGATCTTT TACCTGCTCA GAGTCAGGGC TGGCAGAAGG TCGAATCAAT TGCACTTGAA CATTTTAGTC GGGCTGGGCT TCAAGAAATT AGAACACCGA TTCTTGAACA AACTGAATTG TTTTCAAGGG GAATTGGCGA AAATACTGAT GTTGTGGGCA AAGAAATGTA TAGTTTCGAC GATAGAGGTG GTCGTTCTTG CACATTGAGG CCTGAGGGCA CAGCCCCTGT CGCGAGGTCA ATTATCCAGC ATGGATTATT AAATAATGGC CCTCAAAGAC TCTGGTATAG AGGGCCAATG TTTAGATATG AGCGCCCTCA AGCAGGAAGA CAAAGGCAGT TCCATCAAAT AGGAGTTGAA TTTGTAGGAT TAGCTTCTGT TATGAGTGAT GCTGAGGTCA TTTCAATAGC TTGGAACTTT TTAAAGGATG TTGGTCTAAA TGATTTAACT TTAGAAATTA ATAGTCTTGG AAGTAATGAA GATCGAAATA TTTTCAAAGA AGAGTTGAAA GATTGGCTTA ATCAGAGATT TGACTTGTTA GATGAAGATT CTCAGAAAAG AATTAATGTT AATCCCTTGA GAATATTAGA TAGTAAAAAT AATTCTACAA AAGAACTTTT ATCTGAAGCT CCTTCTTTAA ACGACTTTTT ATCTAGTGAG AGTAAAACTA GATTTGATTA TTTACAGGAG TTACTCGTTA ATCTCAAGAT TCCATATAAA ATTAATTATA ATTTGGTAAG AGGGCTTGAT TATTATTCTC ATACAGCTTT CGAAATAACA AGTGATCATT TAGGTTCTCA AGCTACCGTA TGCGGAGGAG GACGTTACGA TGGATTGATA AGTGAACTTG GGGGGCCTCA AGCTCCTTCT ATAGGTTGGG CTATTGGAAT GGAAAGGCTG GTTATTCTAG CTGGAGATAA AATTTTACAG ACAAAATCTC CGGATGTTTA TGTGATTCAT AAAGGTAAAA AAGCTGAGCA ACTTGCTTTG GAAATTACTT GTCAGTTAAG GTCATCTAAC TTAATTATTG AATTGGACTA CTCAGGTTCA TCTTTTTCAA AACAATTTAA GCGAGCAGAT AAAAGTAGGG CTAAATGGGC CTTAGTTATA GGTGAGGATG AGGTATCTAA AGGTCAGTTA TTAATGAAGA AATTAAGGGA TAAACAAAAG GATGAGGAGA GTAGGGAATA TATTTTCTCA AAGGGGGATC TAGATCAGTT AATTAAAAAG TTGATTGCTT AA
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Protein sequence | MTNLKNLRGM LDLLPAQSQG WQKVESIALE HFSRAGLQEI RTPILEQTEL FSRGIGENTD VVGKEMYSFD DRGGRSCTLR PEGTAPVARS IIQHGLLNNG PQRLWYRGPM FRYERPQAGR QRQFHQIGVE FVGLASVMSD AEVISIAWNF LKDVGLNDLT LEINSLGSNE DRNIFKEELK DWLNQRFDLL DEDSQKRINV NPLRILDSKN NSTKELLSEA PSLNDFLSSE SKTRFDYLQE LLVNLKIPYK INYNLVRGLD YYSHTAFEIT SDHLGSQATV CGGGRYDGLI SELGGPQAPS IGWAIGMERL VILAGDKILQ TKSPDVYVIH KGKKAEQLAL EITCQLRSSN LIIELDYSGS SFSKQFKRAD KSRAKWALVI GEDEVSKGQL LMKKLRDKQK DEESREYIFS KGDLDQLIKK LIA
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