| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_06711 |
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| Symbol | ubiD |
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| ID | 4780936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | - |
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| Start bp | 617548 |
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| End bp | 619125 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640083947 |
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| Product | 3-polyprenyl-4-hydroxybenzoate decarboxylase |
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| Protein accession | YP_001014496 |
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| Protein GI | 124025380 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGACCT TCATGAAATT ATTTCGTCAA GAACCTCTTA CACGGGACAT TAGAGATTTT
CTTACTCTTT TAGAAAAGAA AGGACAACTG AAAAGAATAA GCAGTCCAGT TGATAGTGAC
TTAGAAATTG CGGCAATAAG TGATCGAGTC CTTGGGATGG GAGGTCCTGC TCTACTTTTT
GAAAATGTAA AAGGATCATC AATGCCTGTT GCAGTGAATT TACTTGGGAC GATGGAACGT
GTGGTTTGGA GTATGGGTTT AGAGAAGCAA GAAGAATTGG AAGATTTAGG GAAGAAATTA
GCTCTTCTTC AGCAACCACG TCCTCCGAAA GGGCTTAAAG AAACCAAAGC TTTTGCTTCA
GTTGCATGGG ATCTACTGAA AGCACGTCCA GATATTGATC TATTGCCACC ATGCCATCAA
CAAGTAATTA GTAAAAAAGA CTTGGATCTA AATCATTTGC CACTTTTGCG TCCCTGGCCA
GAGGATGCTG GAGGAGCAAT CACTTTAGGC CTTGTAATAA CAAAAGATCC AGAAACAAGC
GTGCCAAATG TCGGTGTTTA CAGACTCCAA AGACAGTCTG CAAAGAGCAT GACAGTCCAT
TGGTTAAGTG TCAGAGGAGG AGCCAGGCAT CTTCGCAAAG CAGCTGCAAT GAATAAGAAA
CTAGAAGTAG CTGTTGCTAT TGGAGTTCAT CCACTTCTTG TCATGGCGGC AGCAACTCCC
ATTCCAGTGC AGCTAAGCGA GTGGCTTTTT GCAGGCTTGT ATGCAGGAGA GGGTGTTCGA
TTAACCAAAT GCAAAACTAT TGATCTTCAG GTACCAAGTC ATAGTGAAAT TGTTCTTGAA
GGGTCTATAT CTCCTGGAGA AGAGATGATG GATGGTCCTT TTGGAGACCA TATGGGCTTC
TATGGGGGTG CTGAGTCTTC ACCTTTGATT AGATTCCACT GTATGACTCA AAGAAAAAAA
CCAATATTCT TAACAACTTT TAGCGGTCGG CCTCCAAAAG AAGAAGCAAT GCTGGCAATA
GCATTAAATC GAATTTATAC ACCAATACTT AAACAACAAA TACCTGAAAT TATTGATTTT
TTCCTTCCGA TGGAAGCCTT GAGTTATAAG TTGGCAGTCA TATCAATTGA CAAAGCTTAT
CCAGGTCAAG CTAAAAGAGC TGCTATGGCC TTTTGGAGTG CTTTACCCCA ATTTACTTAT
ACAAAATTTG TCGTCGTCGT AGACTCAACA ATTAACGTAA GAGATCCTAG ACAAGTCGTT
TGGGTCTTAT CCAGCCAAGT TGACCCTCAA AGAGATTTAT TTGTGCTTGA AAATACTCCT
TTTGATACCC TTGACTTCGC GAGTGAAAAT ATTGGCTTAG GAGGGAGATT GGCTATTGAT
GCAACAACAA AAATTGGCCC AGAGAAAAAT CATGATTGGG GCAAACCACT AACAAGGCCG
AAAGAGCTTG AAGACAAAGT TGATGAAAGA TGGGAAGAAC TAGGGTTATC GGAACTGGAA
AACAAGCAAC CAAGTCCAGA ATTATTTGGT TATGTTATCG ATGAATTAAT GCGTCAAAAA
CAAATAAACA ATTCATAA
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| Protein sequence | MQTFMKLFRQ EPLTRDIRDF LTLLEKKGQL KRISSPVDSD LEIAAISDRV LGMGGPALLF
ENVKGSSMPV AVNLLGTMER VVWSMGLEKQ EELEDLGKKL ALLQQPRPPK GLKETKAFAS
VAWDLLKARP DIDLLPPCHQ QVISKKDLDL NHLPLLRPWP EDAGGAITLG LVITKDPETS
VPNVGVYRLQ RQSAKSMTVH WLSVRGGARH LRKAAAMNKK LEVAVAIGVH PLLVMAAATP
IPVQLSEWLF AGLYAGEGVR LTKCKTIDLQ VPSHSEIVLE GSISPGEEMM DGPFGDHMGF
YGGAESSPLI RFHCMTQRKK PIFLTTFSGR PPKEEAMLAI ALNRIYTPIL KQQIPEIIDF
FLPMEALSYK LAVISIDKAY PGQAKRAAMA FWSALPQFTY TKFVVVVDST INVRDPRQVV
WVLSSQVDPQ RDLFVLENTP FDTLDFASEN IGLGGRLAID ATTKIGPEKN HDWGKPLTRP
KELEDKVDER WEELGLSELE NKQPSPELFG YVIDELMRQK QINNS
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