| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_06621 |
|---|
| Symbol | |
|---|
| ID | 4779311 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | - |
|---|
| Start bp | 607573 |
|---|
| End bp | 608139 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640083940 |
|---|
| Product | leader peptidase I |
|---|
| Protein accession | YP_001014489 |
|---|
| Protein GI | 124025373 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0681] Signal peptidase I |
|---|
| TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.186965 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATCTA CTGGATCAAA AAAGAATCAA AACCAAAATA GCTGGAAAGG ATTGTTGGTT
TGGATATTAA TTGCGCTTTT ATTAAGATGG CAAGCAGTTG AGCCTAGATG GATTCCATCT
GGATCAATGA TTCCAACTTT GCAAATTCAA GACAGAATAT TGATAGAAAA AATAACCCCA
AGACTTAATA ATAAACTAAA TAAACATTTA AATTTAAATA CGATTGTTAT TTTCAAACCT
CCAAAAATTC TTACAGAAGC AGGTTACAGT GATGGTTCAG CGCTAATTAA AAGAGTCGTT
GGCTTACCTG GAGACAAAAT AGAAGTAACT GATGGGAAAC TATATAGAAA TGGAAAAGAA
ATAAATGAAC CTTGGATTAA AGAGCCTATC CAATATGAAA TGGATGCAAT AAATGTACCT
GAATATTCAC TTTGGGTCTT AGGAGACAAC CGAAATAACA GTTTAGACTC TCATGTTTGG
GGAGCTCTCC CAGAAAAAAA TCTTATAGGT ACGGCGCTTG CAAGGTACTG GCCATTAAAA
AAAATAGGGC CTATTCGGTT CCCATAA
|
|---|
| Protein sequence | MTSTGSKKNQ NQNSWKGLLV WILIALLLRW QAVEPRWIPS GSMIPTLQIQ DRILIEKITP
RLNNKLNKHL NLNTIVIFKP PKILTEAGYS DGSALIKRVV GLPGDKIEVT DGKLYRNGKE
INEPWIKEPI QYEMDAINVP EYSLWVLGDN RNNSLDSHVW GALPEKNLIG TALARYWPLK
KIGPIRFP
|
|---|
| |