Gene NATL1_06571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_06571 
Symbol 
ID4779580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp603350 
End bp604315 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content35% 
IMG OID640083935 
ProductABC transporter substrate-binding protein 
Protein accessionYP_001014484 
Protein GI124025368 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.140221 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAATA AAAAGGTTAT TTCTGAGTAT ATTTATAAGA AAAACAAGAT ACTTAGTTTA 
TCTATTTTTC TTGCTTTAAA TATTTTATTC CTGACAGGAT GTGTAAATAA AAACACCTAT
AAACCACCAA ATGATAAGCC TTTCGTTTTA ACTACTTTTA CAATTTTGGC TGATCTTGCT
AGAAATGTTG CTGGGGATAG ACTTCTGGTT GAATCAATAA CGAAACCAGG AGCAGAAATC
CATAGTTATC AATTTACACC TAGTGATATT GTTAAAACTA AAGGAGCAAA ACTGATTATT
GAAAATGGTT TAGGTCTTGA AGCATGGTTT TCGAAATTTA TGAGTAGTAC GGGTGATATT
CCCAAGGTGA AATTAACTGA GGGGATAAAG CCATTATTGA TAGATGGTGA TGCTTATGCA
GGCAGGCCAA ATCCTCATGC CTGGATGTCA CCCAAAAGAG CTATGAATTA TGTAGATAAA
ATAGTCGATG CTTTTATCGA AATTGATCCT GATGGAGCTC TTGAATATTC ATCTAACACT
TCAACCTATA AAGCTAAACT TGAATCACTT GATAAAGAGC TAAGGGATTC TTTATCCTCT
ATTCCGAAGA GAAGAAGATT TTTGGTGACA TGTGAAGGAG CCTTTACTTA TCTGGCCCGT
GATTACGGTA TGAAAGAGGC ATATTTGTGG CCAGTTAATG CTGAAAGTCA AGTAACCCCA
AGGAGAATGG TGAATCTAAT AAAAAAAATC AAAGAAAATG AAGTCCCAAC AATTTTTTGC
GAAAGTACTG TGAGTGCAGA AGCACAAATG GAAGTTGCGA AATCAAGTGG AGCTGTTTTT
GGTGGAACTT TCTACGTTGA TTCACTCTCA GATCTAAATG GTCCTGCTCC TACCTATATA
GATTTACTAA GGCACAATGT TCGATTAATT ACTAAGGGCC TATCCATTTC AGAAGTGAAA
AAATAA
 
Protein sequence
MFNKKVISEY IYKKNKILSL SIFLALNILF LTGCVNKNTY KPPNDKPFVL TTFTILADLA 
RNVAGDRLLV ESITKPGAEI HSYQFTPSDI VKTKGAKLII ENGLGLEAWF SKFMSSTGDI
PKVKLTEGIK PLLIDGDAYA GRPNPHAWMS PKRAMNYVDK IVDAFIEIDP DGALEYSSNT
STYKAKLESL DKELRDSLSS IPKRRRFLVT CEGAFTYLAR DYGMKEAYLW PVNAESQVTP
RRMVNLIKKI KENEVPTIFC ESTVSAEAQM EVAKSSGAVF GGTFYVDSLS DLNGPAPTYI
DLLRHNVRLI TKGLSISEVK K