| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_06391 |
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| Symbol | hemE |
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| ID | 4779337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | - |
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| Start bp | 579581 |
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| End bp | 580639 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640083917 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_001014466 |
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| Protein GI | 124025350 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.401207 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.983268 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAAA CTACTCCTTT ACTACTCCGT GCAGCTCGCG GAGAACATGT TGAAAGGCCC
CCAGTTTGGA TGATGAGACA AGCGGGGAGA TACATGAAGG TATATCGCGA CCTTCGTGAT
AATCATCCAA GCTTCAGGGA AAGATCCGAA AACCCCGATC TTTCTTATGA AATTTCAATG
CAACCTTTTA CAGCTTTTCA ACCAGATGGA GTGATACTTT TTTCAGATAT CTTGACTCCT
CTACCTGGGA TGGGAATTAA CTTTGACATC GTTGAAAGCA AAGGACCCTT AATAAATGAC
CCAATAAGAA GCCTCAAACA GGTTAAAGAC CTTAAACCCC TTCAACCAGA AGAAAGCATG
TCTTTTGTTG GGGAAGTCCT TGGAAGGCTA AGGGAAAGCG TTGGGAACAA GGCTGCAGTT
CTTGGGTTTG TAGGTGCTCC TTGGACTCTT GCTGCATATG TTGTAGAGGG AAAAAGCAGC
AAAAATTATG CAGTTATAAA GGCGATGGCA TTCCAAGAGC CAGAACTACT GCATCAACTT
TTAAATCACT TTGCAGAATC AATTGCAAAC TATTTATCCT ATCAAATTCA ATCTGGGGCC
CAAGTAGTTC AAATGTTTGA TTCATGGGCA GGACAATTAA GTCCACAAGA TTATGACGAG
TTTGCTGCGC CTTATCAACA AAAAGTAGTC AATTTAGTAA AAGAAAAACA TCCAGATACA
CCTATGATTT TATACATCTC AGGTAGCGCG GGAGTTCTTG AAAGGATGGG ACAAACCGGA
GTAGATATAG TCTCTCTAGA TTGGACTGTT GACATGGCAG ATGGACTAAA AAGGCTGCCT
CAATCAGTTG GAGTCCAAGG AAATGTTGAT CCAGGACTTT TGTTTGGTAC TCCTGATGCG
ATCAGATCAA GAATTGTTGA TGTCGTCAAA AAAGCGAAAG GTAGAAAACA TATTCTTAAC
CTTGGTCATG GAATACTTCC AGGGACGCCA GAAGAAAATG CAAGAGTATT TTTCGAGGCT
GGTAAAAATG TGAATGAACT CATAAAAGTT TCATCTTGA
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| Protein sequence | MNETTPLLLR AARGEHVERP PVWMMRQAGR YMKVYRDLRD NHPSFRERSE NPDLSYEISM
QPFTAFQPDG VILFSDILTP LPGMGINFDI VESKGPLIND PIRSLKQVKD LKPLQPEESM
SFVGEVLGRL RESVGNKAAV LGFVGAPWTL AAYVVEGKSS KNYAVIKAMA FQEPELLHQL
LNHFAESIAN YLSYQIQSGA QVVQMFDSWA GQLSPQDYDE FAAPYQQKVV NLVKEKHPDT
PMILYISGSA GVLERMGQTG VDIVSLDWTV DMADGLKRLP QSVGVQGNVD PGLLFGTPDA
IRSRIVDVVK KAKGRKHILN LGHGILPGTP EENARVFFEA GKNVNELIKV SS
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