| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_06231 |
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| Symbol | ecm27 |
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| ID | 4779528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | - |
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| Start bp | 566950 |
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| End bp | 568044 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640083900 |
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| Product | CaCA family sodium/calcium exchanger |
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| Protein accession | YP_001014450 |
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| Protein GI | 124025334 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0530] Ca2+/Na+ antiporter |
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| TIGRFAM ID | [TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.379015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCATCAA TATTATTGTC ATTTTTAGAG CTTATTGCTG GGATACTTTT ACTTTTTAGC
GGCGGGGAGT TCTTTATTCA AGGATCTGTA GCTTTAGCCT TAATCCTTGG GATTCCTCAA
CTAGTCATTG GTTTAACAAT AGTATCTCTC GGGACAAGTG CACCTGAACT ATTTGTGAGT
GTCAACTCCT CCCTCAATGG ATCAGATAGT CTAGCGTTGA GCAACATTGT TGGCAGCAAT
ATTTTCAATG TGATGGTAGT TCTCGGAGGA AGTGCACTTT TACGACCATT AAGAGTTGAA
AGTCGTCTTG TAAGAAGAGA CATTCCTCTT CTTTTAGCAG TCTCAACTGC CGTTTGGGGG
ATGGCCGCTT CAGAGCTGAT AACTTGGCAA TTTGGAGTAG CTTTAATAGT TGCGCTAATA
ATAAATACCA CTTGGGAAAT TCGCACAGCA AGAGAGGAAC CTCAAAAAAC CCAAGAAGCA
GAGCCAGAAA TCAATATAGA AAAAGACTCA ACAAGTTTAT TAAATGCAGG CGTGAAATTA
TTAGGTGGTA TTTTCTTGCT AACTCTTGGA TCACGACTTT TAATAGAAGG CGCATCTACA
ATTGCAGGGT TGTTAGGGAT AAGCGAAGCT ATAATTGGGT TAACGATAGT TTCACTGGGC
ACTTCTTTAC CTGAGTTAAT TACGTCATTA GTGGCCGCCA TTCGTGGTCA AACTGATCTA
GCGATAGGCA ACGTAATTGG AAGTTGTTTA TTAAATCAAT TACTAGTTTT AGGTAGCTGT
TCTGTATTAT CTGGAGGCAG TGGTTTAGTG GTTGAGAGTT TACTAATAAC TAAGGATATT
CCTATCATGG TAATTACTAC ACTTGCGTGC ATGCCAATTT TTTGGACAAA AGGAATAATA
AGTAGAGGAG AAGGTGGCGT TTTATTAGGA TTGTATATGC TTTACATTGC AGACAAAATA
ATACCTCTAA CTCTACCAAC TTTACATACA GCATTCAAAG AATTAGTTTT TATAGCTATA
TCATTATCAA TAACAATAAT TATATACAAA ACAATTGCTT ACTGGTTAAG ACTAAGAAAA
AGGTCTAATA ACTAA
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| Protein sequence | MPSILLSFLE LIAGILLLFS GGEFFIQGSV ALALILGIPQ LVIGLTIVSL GTSAPELFVS
VNSSLNGSDS LALSNIVGSN IFNVMVVLGG SALLRPLRVE SRLVRRDIPL LLAVSTAVWG
MAASELITWQ FGVALIVALI INTTWEIRTA REEPQKTQEA EPEINIEKDS TSLLNAGVKL
LGGIFLLTLG SRLLIEGAST IAGLLGISEA IIGLTIVSLG TSLPELITSL VAAIRGQTDL
AIGNVIGSCL LNQLLVLGSC SVLSGGSGLV VESLLITKDI PIMVITTLAC MPIFWTKGII
SRGEGGVLLG LYMLYIADKI IPLTLPTLHT AFKELVFIAI SLSITIIIYK TIAYWLRLRK
RSNN
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