Gene NATL1_06181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_06181 
Symbol 
ID4779578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp561248 
End bp561952 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content30% 
IMG OID640083895 
Productcell wall biosynthesis glycosyltransferase 
Protein accessionYP_001014445 
Protein GI124025329 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.630616 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.683964 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAGAT CACAAAAAAT TCCGGATCTC AGCATCATCA TACCAACTTT AAATGAAGCG 
GATCACCTCC CTCTTCTTCT TGCTGATTTA AATGAATGGC CATATAATTT TGAATTAATC
ATAGTTGATG GAGGAAGTAT AGATTTAACT ATTTCGATTG CACAAATACA AGGAATAGAT
GTTATTAAAA GCAGTAAAAA GAATAGAGGC TATCAATTAA AAAAAGGGGC ATCAAAGGCA
AGAGGAGATT GGCTTTTATT TCTACATGCC GATAGTAGAC TAAGCCCCAG TTGGTTTAAA
AGGTTATCTC AAATAATACA AAATAAAAAG TCAGAAAATT TTGCATGGTA TTTTGATTTT
AAAATCAAAA AGCATAATTT AGAATTCAGA TTTTTAGAAA TAGCAGTAGC ACTAAGAAGT
CATTTATTAC AACATCCTTA TGGAGATCAA GGCCTACTAA TACATAAAGA TCTCTATTCC
AATACAGGAG GGTATTCATC CTTGAAAATA ATGGAAGATA TCGACTTGAT AACAAGAATT
ACTAAAAAGA CTAAATTAAA GCGTATTAGA GAAAATATAT ATACAGATGA TATAAAGTGG
AGGAATTCAA ATATAATAAA ACGTGCAATT AAAAATGCTA AATTAAGAAA TATGTGGCGT
CAGGGTTGTG ACATAGATTA TCTTTCAAAA GAATATAATT CATGA
 
Protein sequence
MARSQKIPDL SIIIPTLNEA DHLPLLLADL NEWPYNFELI IVDGGSIDLT ISIAQIQGID 
VIKSSKKNRG YQLKKGASKA RGDWLLFLHA DSRLSPSWFK RLSQIIQNKK SENFAWYFDF
KIKKHNLEFR FLEIAVALRS HLLQHPYGDQ GLLIHKDLYS NTGGYSSLKI MEDIDLITRI
TKKTKLKRIR ENIYTDDIKW RNSNIIKRAI KNAKLRNMWR QGCDIDYLSK EYNS