Gene NATL1_06101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_06101 
Symbol 
ID4779698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp555761 
End bp556309 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content41% 
IMG OID640083887 
Productcarboxysome structural protein CsoS1 
Protein accessionYP_001014437 
Protein GI124025321 
COG category[C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4577] Carbon dioxide concentrating mechanism/carboxysome shell protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.33467 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAACT CTTCAAATCG TCGACCAAAA AGTAGTAATA AAACTATTAA GCCTAAAGAT 
CAGGTTGTTG ATGTTACTCC TTTGAATTCA ACTACTAAAT CAAAAACCTC TTCAAGGATA
CAGTCTTCCT CAGCTGAAAA AGCATCTAAT ACTAAAAGCA TTCCTAGTGC TAAAAATCTA
TCCAATGCTT CCGAGGGTGG GGGCTCATTT AATGCCCGAA TTGGACAAAA CAAAGCTTTT
GAAACTAAGT CAAATTTTGG AATAGCTCTA GGAATGATTG AAACTCGTGG CCTTGTACCA
GCAATAGAAG CAGCAGATGC AATGACTAAG GCTGCTGAAG TTAATTTGAT CGTTAAAGAA
CTCGTTGGTG GAGGATATGT AACAGTAATG GTTCGTGGTG AGACTGGTGC TGTAAATGCT
TCAGTAAGAG CAGGTGCTGA TGCCTGTGAG CGCGTTGGAG ATGGATTAGT AGCTGCACAT
ATCATTGCCC GACCTCATGG CGAGATTGAG CCAGCATTGA GAGGAAGTGG AGCAAAAAGG
AGAAGTTAA
 
Protein sequence
MTNSSNRRPK SSNKTIKPKD QVVDVTPLNS TTKSKTSSRI QSSSAEKASN TKSIPSAKNL 
SNASEGGGSF NARIGQNKAF ETKSNFGIAL GMIETRGLVP AIEAADAMTK AAEVNLIVKE
LVGGGYVTVM VRGETGAVNA SVRAGADACE RVGDGLVAAH IIARPHGEIE PALRGSGAKR
RS