Gene NATL1_06081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_06081 
Symbol 
ID4779704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp555190 
End bp555465 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content41% 
IMG OID640083885 
Productputative carboxysome peptide A 
Protein accessionYP_001014435 
Protein GI124025319 
COG category[C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4576] Carbon dioxide concentrating mechanism/carboxysome shell protein 
TIGRFAM ID[TIGR02703] carboxysome peptide A 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.315065 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCATTT GTAAAGTTCT CAAACCACTT GTCTCAACCA ATCGTATTCC AGGCTTTGAA 
CATAAGCATT TACAGGTTGT ATTGGACGGC AGCTCAAAAA AAGTTGCTGT TGATGCTGTT
GGATGTAAAC CAGATGATTG GGTTATATGT GTAGGAAGTT CTGCCGCTCG CGAAGCTGCT
GGAAGCAAGT CTTATCCAAG TGATTTAACT ATTGTTGGAA TTATTGACCA TTGGGATCCA
GAGACACAAC AACAGATATC AGGAGGAGCA AAGTAA
 
Protein sequence
MLICKVLKPL VSTNRIPGFE HKHLQVVLDG SSKKVAVDAV GCKPDDWVIC VGSSAAREAA 
GSKSYPSDLT IVGIIDHWDP ETQQQISGGA K