Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_05961 |
Symbol | |
ID | 4779869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | + |
Start bp | 541577 |
End bp | 542590 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640083873 |
Product | protochlorophyllide oxidoreductase |
Protein accession | YP_001014423 |
Protein GI | 124025307 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01289] light-dependent protochlorophyllide reductase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.641306 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTCTAG TACAAGCTGC ACCAGGAACT GTATTGATTA CTGGAACAAC GTCAGGAGTT GGGTTGTATG CCACAAAGTC TTTGGTTGAG AGGGGGTGGA GAGTTATTAC CGCAAATAGA TGTTCTGTGA GAGCTGAAGC GTCTGCATCC GCAGTTGGAT TACCTACCAA TAGTCCAAGA CAACTTAAAC ATATACAAAT TGATCTTGGC GACTTGGATA GCGTACGTAA TGGGGCTAAA AGTCTTCTAG AAGATTTGGA AAAGCCATTG GATGCTTTGG TTTGTAATGC TGCTGTATAT CTTCCGCGTT TAAAAAAACC TTTGAGATCT CCACAGGGAT ATGAAATATC AATGGCAACG AATCATTTTG GGCATTTTTT ATTAATTCAG ATGCTATTGG AAAATCTTAG TAAGTCTTCA AGACCAGTCT GGAAGGGAAG ATCTTGGGGG GTGGAATCAT CTAGAGTGGT TATCTTAGGA ACCGTAACTG CTAACAATAA AGAACTTGGT GGGAAAATAC CAATACCAGC TCCTGCTGAT CTGGGAAATC TATCTGGTTT TGAAGAAGGT TTTTGCGATC CCATCTCAAT GGCTAGTGGA AAACGTTTTA AACCAGGGAA AGCCTATAAA GACAGTAAGT TATGCAATAT GATTACAACC CAAGAATTAC ATAGGCGATT TAATTCTTCT CCAATTCTTT TTAGTTCTCT ATATCCAGGA TGTGTAGCTA ATACCAGATT ATTTAGAAAC ACTCCTAAAC TATTTCAGTG GTTGTTTCCA TGGTTTCAGA AATTAATAAC AGGAGGTTTC GTAAGTGAAG CTCTGGCTGG CGATAGAGTA GCCCAAGTTG TTTCAGACCC TCAATTTGCT ATTTCTGGAG TTCATTGGAG TTGGGGTAAT AGACAACGCA AGAATAGACA ACAATTTTCA CAAGAATTGT CTGATCGAGT CACTGATCCA GTCACCTCTA GAAAAGTTTG GGAATTGTCT ATGCGATTAG TTGGGCTGAA ATAA
|
Protein sequence | MALVQAAPGT VLITGTTSGV GLYATKSLVE RGWRVITANR CSVRAEASAS AVGLPTNSPR QLKHIQIDLG DLDSVRNGAK SLLEDLEKPL DALVCNAAVY LPRLKKPLRS PQGYEISMAT NHFGHFLLIQ MLLENLSKSS RPVWKGRSWG VESSRVVILG TVTANNKELG GKIPIPAPAD LGNLSGFEEG FCDPISMASG KRFKPGKAYK DSKLCNMITT QELHRRFNSS PILFSSLYPG CVANTRLFRN TPKLFQWLFP WFQKLITGGF VSEALAGDRV AQVVSDPQFA ISGVHWSWGN RQRKNRQQFS QELSDRVTDP VTSRKVWELS MRLVGLK
|
| |