| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_05941 |
|---|
| Symbol | lplA |
|---|
| ID | 4779883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | - |
|---|
| Start bp | 540196 |
|---|
| End bp | 540945 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640083871 |
|---|
| Product | protein ligase |
|---|
| Protein accession | YP_001014421 |
|---|
| Protein GI | 124025305 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0095] Lipoate-protein ligase A |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAATC TAGAAGAAGT CCTTTATTTA AACCCTCTTG AGTTAAGTGG GCCAGAGCAA
ATGGGAATTG ATCTCTTCCT ATTAGAAAAG TCATTAGCTG AAAACAATTT TAATATGGCA
GTACGTTTTT ATACGTGGGA TGGAGACTGG CTATCGATTG GAAAAAATCA AAAAGAACTG
CCAAAAAAAT GGATTGAACT TTTAAAAAAT GAACAGTTAA AAATTGTAAG AAGACCTAGT
GGAGGGAACG CTGTTCTTCA TAGCAGAGGA CTCACTTACG CTCTTATATG GAAATATCCA
CCAAGGAATA AAAAAGAATC ATATTTAAAG ACAACTCAAT GGCTAAAAGA TGGTATTAAA
AAAGCTGGAG TGGATCTGTT TTATGGTAAT CAGCCTGTGA ATATATCTAA TAGTAATTGT
TTTTCGACTT CAACATTAGC TGACCTAGTT GATCAAGATA AAAACAAACA TATTGGAAGT
GCTCAGTACT GGAGAAACGG ACACTTACTT CAGCATGGAG AGATCTTAAT GGAACCGTCA
AAACAGTTAT GGAAAAAAGT TTTTAATGCA GATCCTCCAA AGATAAAAAA TGAAATCAAA
GATAAAGATA AAGTTATAAG TTTCCTAAAA GAGTCGTTAG GGAAAACATG GCCTAATTCA
CAGATATCTA CATATACATT AGATCAAAAA GACAAAGAAA TAATAAAACG TTTTGCTAAA
AATAAATTTA AAAAAATAAA TAATTATTAG
|
|---|
| Protein sequence | MNNLEEVLYL NPLELSGPEQ MGIDLFLLEK SLAENNFNMA VRFYTWDGDW LSIGKNQKEL
PKKWIELLKN EQLKIVRRPS GGNAVLHSRG LTYALIWKYP PRNKKESYLK TTQWLKDGIK
KAGVDLFYGN QPVNISNSNC FSTSTLADLV DQDKNKHIGS AQYWRNGHLL QHGEILMEPS
KQLWKKVFNA DPPKIKNEIK DKDKVISFLK ESLGKTWPNS QISTYTLDQK DKEIIKRFAK
NKFKKINNY
|
|---|
| |