Gene NATL1_05831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_05831 
SymbolilvB 
ID4779079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp528967 
End bp530730 
Gene Length1764 bp 
Protein Length587 aa 
Translation table11 
GC content40% 
IMG OID640083860 
Productacetolactate synthase 3 catalytic subunit 
Protein accessionYP_001014410 
Protein GI124025294 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 
TIGRFAM ID[TIGR00118] acetolactate synthase, large subunit, biosynthetic type 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCTGA CTTCTACGCC TAATCAAATA GAAGATTCAG GGACACAAAC TCAACATGAG 
ATGTCAGGAG CTGATGCCTT GATGGATTCT CTTCGTAGGC ATGGAGTTGA TACTATTTTT
GGTTATCCTG GCGGAGCAAT CCTCCCAATA TATGACGCGG TTTTTAAAGC GGAGCAAGAG
GGATGGTTAA AACACATTCT TGTTCGACAT GAACAAGGTG GAACTCATGC TGCAGATGGT
TTCGCTAGAG CGACGGGAAA AGTAGGGGTT TGTTTTGGTA CATCAGGTCC AGGCGCTACG
AATCTAGTCA CAGGAATAGC AACTTCTCAG ATGGATTCTG TACCTCTTGT CGTCATAACA
GGACAAGTTC CTAGACCTGC TATTGGAACT GATGCTTTTC AAGAAACAGA TATTTTTGGA
ATAACACTTC CAATTGTTAA ACATTCATGG GTCGTAAGAG ATCCATCTGA AATTGCAAAA
GTTGTAGCGC AAGCCTTTCT CATCGCTTCG TCGGGTAGAC CAGGCCCTGT TTTGATTGAC
ATACCGAAAG ATGTTGGACA AGAGATGTTT AAATATCTTC CTGTTGAGCC TGGTTCAATA
AAGCCACTAG GGTTTGAACT ACCATTCGCG CCAGAACATA AGGCCATAAG TTCAGCCTTA
GATCTAATTG AAAATGCTGA GCAACCACTC CTTTACGTTG GCGGCGGTGT TATTTCTTCG
GGGGCACATG AAACTCTGGC TGCGATTGCT AATAGATATC AAATACCCGT AACAACAACT
TTGATGGGAA AAGGCGCTTT CGATGAACGT GATCCTCTAT CAGTTGGAAT GCTTGGTATG
CATGGAACAG CTTATGCCAA CTTTGCTGTG ACTGAATGTG ATTTGTTGAT TGCCATTGGA
GCAAGATTTG ACGACAGAGT TACAGGTAAA TTAGATACTT TTGCTCCTAA AGCAAAAGTA
ATTCATTTTG AGATTGATCC TGCTGAAATA AATAAAAATA GAGTTGTTGA AGTTTCTGTA
TTAGGTGATG TTGGAATTAG TCTTGTTAAA TTATTAGATC TCAGTAACCA AAGGAAAACA
AATCCAAGAA CTTCTCAATG GCTTAACAAA ATTAAAAACT GGAAAAATAA TTTTCCTTTG
ATAACTCCCC CTAAAGAAGG AGAAATTTAT CCACAGGAAG TTTTAATTGC GTTGAGAGAT
TTGGCTCAAG ATGCTTACAT TACAACTGAT GTTGGACAAC ATCAGATGTG GGCAGCTCAG
TATTTGTTGA ATGGACCAAG ACAATGGATT AGCAGTGCTG GACTTGGGAC AATGGGCTTT
GGAATGCCCG CTGCAATGGG AGTCAAAGTT GCTTTGCCTA AGGAGAAAGT AATTTGTATC
GCCGGTGATG CAAGTATCCT CATGAACATT CAGGAGCTTG GAACTATTGC TCAATATAAG
TTGAATTTAA AAGTAATTAT CATCAATAAT CATTGGCAAG GGATGGTTAG GCAATGGCAA
GAAAGTTTTT ATGATGAACG ATATTCGGCA TCTAACATGT CTGTTGGGGA GCCAGACTTT
ATTTCGCTAT CTAAGGCTTT TGGAATTGAG GGTATAGTGA TTTCAGAAAG AGAAAACCTA
ATTCCTCAAC TCCAAAAAGC ATTGGAGAAT GAAGGACCAG TTCTTGTAAA CGTAAATGTA
AGAAAAGGTG AAAATTGTTA CCCTATGGTG CCACCTGGAA AAAGTAATGC TGAAATGGTT
GGCATATCAG AGATTAAGAA ATAA
 
Protein sequence
MTLTSTPNQI EDSGTQTQHE MSGADALMDS LRRHGVDTIF GYPGGAILPI YDAVFKAEQE 
GWLKHILVRH EQGGTHAADG FARATGKVGV CFGTSGPGAT NLVTGIATSQ MDSVPLVVIT
GQVPRPAIGT DAFQETDIFG ITLPIVKHSW VVRDPSEIAK VVAQAFLIAS SGRPGPVLID
IPKDVGQEMF KYLPVEPGSI KPLGFELPFA PEHKAISSAL DLIENAEQPL LYVGGGVISS
GAHETLAAIA NRYQIPVTTT LMGKGAFDER DPLSVGMLGM HGTAYANFAV TECDLLIAIG
ARFDDRVTGK LDTFAPKAKV IHFEIDPAEI NKNRVVEVSV LGDVGISLVK LLDLSNQRKT
NPRTSQWLNK IKNWKNNFPL ITPPKEGEIY PQEVLIALRD LAQDAYITTD VGQHQMWAAQ
YLLNGPRQWI SSAGLGTMGF GMPAAMGVKV ALPKEKVICI AGDASILMNI QELGTIAQYK
LNLKVIIINN HWQGMVRQWQ ESFYDERYSA SNMSVGEPDF ISLSKAFGIE GIVISERENL
IPQLQKALEN EGPVLVNVNV RKGENCYPMV PPGKSNAEMV GISEIKK