Gene NATL1_05771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_05771 
SymbolfixC 
ID4780031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp523102 
End bp524232 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content37% 
IMG OID640083854 
ProductNAD binding site 
Protein accessionYP_001014404 
Protein GI124025288 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID[TIGR02032] geranylgeranyl reductase family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.161819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCCTCA TAGATGTTGC CATTATTGGA GGGGGAGCAT CAGGTACTAC TACAGCATTT 
CATCTAGCAA GTAAAAGTAA AAAGGTATGT ATTCTTGAAA AAAATGTTTC ATCTCCAGAG
AAAATTTGCG GGGGTGGAAT GTCTGCTGCA GTGCAAAATT GGTTTCCTTT TAGACTTTTA
CCAATAGTTG ATGAAGTAAT AACAAATGTA GAGTTTAGTT GGTGCAATAC CGACAAAGTA
GTCGCTAAGC TCTCTGGGTC TTCTCCCTTT TGGATAGTTA AACGTGAAAG ACTTGATTCA
TTCTTATTAG ATCAAGCACT AAATTCTGGT TGTAATTTAT TGACTACCTT TAATGTAGTC
GATATAAGAA AACAATCTAA TGTCTGGCAC ATTACCGCTC TTGATGGGAG ACAAATAGAG
GCTAGAGCAG TTGTTATTGC TGATGGTTCT CAATCGCCAT GGTCTAAAAC TTTTAATTTA
GGTCCACCTC AACAGAAATT TGCCTCCACT TTCTCAGGGA GAATTAAAAG GAGGGGAAAT
TTAAGGACTG AAACTGCCAG ATTTGAATTT GGCCTAGTAA AAAATGGATT TGCATGGGCC
TTTCCATTAG ACAATGAAGT AAATATTGGG ATGGGAACTT TCCTAGATAA CAAGAATTCA
CTTCCAGTTA ATGAAATACT TAAATCATTT CTTCCTGATT TAGGTTTTGA TCCTTCTGAA
GTAATTGGTC ATGAAAAAAA ATTAAGGATA TGGAATGGCC ACTATAAATT AAACGGAGAA
GGAATTCTCT TGGTTGGCGA TGCTGCCTCA TTATGTGATC CCTTTTTGGC GGAAGGATTA
AGACCCGCTT TAATGAGTGG ATTTGAAGCT GCAAAAAGCC TTATTTATTG GCTAGATGGA
GAAGTGAGTT GTTTAGACGC ATATACAAAA ACGATGCAAA TAAACTGGGG GAATTCGATG
GCTTGGGGTA AAAGAATTTC TCAAGTTTTT TATCGTTTTC CCAAAGTCGG ATACCAATTA
GGTGTAAAAA GGGCTACCGC TCCAAAAAGA ATTGCACAAA TTCTTTCAGG TGAGATGAGT
TATGAAGACA TTGCAAAAAG AGTAATCAAG AGATTACTCT TTCAAAATTA A
 
Protein sequence
MTLIDVAIIG GGASGTTTAF HLASKSKKVC ILEKNVSSPE KICGGGMSAA VQNWFPFRLL 
PIVDEVITNV EFSWCNTDKV VAKLSGSSPF WIVKRERLDS FLLDQALNSG CNLLTTFNVV
DIRKQSNVWH ITALDGRQIE ARAVVIADGS QSPWSKTFNL GPPQQKFAST FSGRIKRRGN
LRTETARFEF GLVKNGFAWA FPLDNEVNIG MGTFLDNKNS LPVNEILKSF LPDLGFDPSE
VIGHEKKLRI WNGHYKLNGE GILLVGDAAS LCDPFLAEGL RPALMSGFEA AKSLIYWLDG
EVSCLDAYTK TMQINWGNSM AWGKRISQVF YRFPKVGYQL GVKRATAPKR IAQILSGEMS
YEDIAKRVIK RLLFQN