Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_05721 |
Symbol | gpmB |
ID | 4780107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | - |
Start bp | 516869 |
End bp | 518197 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640083849 |
Product | putative alpha-ribazole-5'-P phosphatase |
Protein accession | YP_001014399 |
Protein GI | 124025283 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0406] Fructose-2,6-bisphosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.169271 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTGC GTCTAATTTT TGTCCGTCAT GGATTGAGCA GTTTTAACAA GGAAGGTCGT ATTCAAGGAA GAAACGACCT TTCAACATTA ACTAAAGAAG GGCAATTGCA AGCTGAAGCG GCCGGAAGAA CAATCTCTTC TATTCCAATA GATGCAGTTT ATAGCTCCCC GTTACAAAGA GCATCAGAAA CCACAAAAAT CATTATCAAA GAGCATCAAA GCGAGCTTAA AGTAACTTAT ACAAATGAAC TCCTAGAGGT TGACCTTGGG CCTTGGAGTG GTTTAACAAA AAATGAAATA AAAAATCAGT TTCCAGAAGA GCTTTCTATT TGGCAAAAAG AGCCAAAGGA ACTAACCATT AATAGAGACG ACGGTTCAAA ATTTCAACCA ATAAAAGAAC TCTTATATCA AGCTGAAAAT TTCTTAAAGT CTTTATTTGA TGCTCATTCA GGGTCTAATA AAACCATTTT GATAGTTGCC CATAATGCAA TTCTTAGATG TTTGATACTG AAATTAATTA ATGAGCCATC AAAAGGGTTT AGAAGATTGA AGTTAGATAA TACCTCAATC TCAATTTGCA ATATTAATTT TAATGATTGG AACGATAGAC AAGTTCAAAT CCAATGTCTC AATAATATCG CTCATTTACA TCCTACAATT CCAAAAAAAA GCAGTAAAAA AAGAATTATT TTAGTTAGGC ATGGTGAAAC AGACTGGAAT AAACAAGGAA GGTTTCAAGG ACAAATTGAT ATTCCCTTAA ATAAAAATGG TAAATCCCAA GCAAAGGCCG CAAGTGAATT TTTAAAACCT AATATTATAC AAAAAGCTTT TAGCAGCTCT CTATCAAGAC CAAAAGAAAC AGCTCAGATA ATTCTAAACG AACATCCAGG GATCGAAATT ACTCTCAAAG ATAACCTAAT AGAGATTGGT CACGGAAAAT GGGAAGGGAA GTTGGAGTCT GAGATAAAAA CCGACTGGCC AGATCTTCTA CAAACATGGA AGATTTCACC TGAAAAAGTT CAAATGCCAG AGGGAGAAAA TATAAAAGAA GTCTCCACGA GATCCATTAC TGGTTGGGAT GAGATTTGCC AAGACCTTAA AAACAATGAA ACCGCATTGG TTGTCGCTCA TGATGCGGTT AACAAAACCA TTCTTTGTCA TCTATTAGGG CTAATGCCAT CAAATATTTG GATGATAAAA CAAGGTAATG GAGGCGTTAC AGTCATTGAT CTCTCAGACA AAGATGGTGA ACCAGATCAA ATCACCTGTC TAAATATCAC TTCACATTTG GGAGGTATTA TCGACTCAAC AGCTGCTGGA GCTCTTTAA
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Protein sequence | MTLRLIFVRH GLSSFNKEGR IQGRNDLSTL TKEGQLQAEA AGRTISSIPI DAVYSSPLQR ASETTKIIIK EHQSELKVTY TNELLEVDLG PWSGLTKNEI KNQFPEELSI WQKEPKELTI NRDDGSKFQP IKELLYQAEN FLKSLFDAHS GSNKTILIVA HNAILRCLIL KLINEPSKGF RRLKLDNTSI SICNINFNDW NDRQVQIQCL NNIAHLHPTI PKKSSKKRII LVRHGETDWN KQGRFQGQID IPLNKNGKSQ AKAASEFLKP NIIQKAFSSS LSRPKETAQI ILNEHPGIEI TLKDNLIEIG HGKWEGKLES EIKTDWPDLL QTWKISPEKV QMPEGENIKE VSTRSITGWD EICQDLKNNE TALVVAHDAV NKTILCHLLG LMPSNIWMIK QGNGGVTVID LSDKDGEPDQ ITCLNITSHL GGIIDSTAAG AL
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