Gene NATL1_05411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_05411 
SymbolxthA 
ID4780451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp489714 
End bp490541 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content34% 
IMG OID640083818 
Productexodeoxyribonuclease III 
Protein accessionYP_001014368 
Protein GI124025252 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.186769 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTTGTTG CAACCTGGAA TGTGAATTCT ATTCGTTCAA GAATAGATCA TGTCAAAGAA 
TGGCTCATCA CTAACAAGAT TGACATTCTT TGCTTACAAG AAACAAAAAC AGAGGATAAG
TTTTTTCCAA TTGAAAATTT TTCAGACCTT GGGTATGAGG TATCAATCTC TGGCCAAAAG
TCTTACAATG GAGTGGCAAT AATAAGTCGA TTCCCAATTA ATAATATAAA GATTGGGTTT
AATGAAGTTA TCAACGACTA TCAAGATTTA TCTATATTAA GTGAGCAAAA AAGAATTATA
AGCGCTGATA TCAATGATAT TAGAATCATA AATGTTTATG TTCCAAATGG ATCATCTATA
AATTCAGATA AGTTTATTTA TAAAAAAAAA TGGCTGGAAT GCCTACAGGT TTACCTAAGA
GAAATCAATA AAAATAATAC ACCAATATGT TTACTAGGAG ACTTTAATAT TGCCCCTGAA
GATAGAGATA TCCATACACC AAGTAGATAT GAAGAGTCAA TTATGGCCTC TTCCAAAGAG
AGGGAATTAC TCAAAGATGC TTTAGGAGGG GAATTAGAAG ATGTTTTTAG GATTTTTGAG
CCGGGAGAGA AAAATTGGTC TTGGTGGGAT TATCGCCATT CAGCCTGGGA AAGAGACAAG
GGTTGGAGGA TCGATCATAT TTACCTAACA GAAGATATTC TTAGTTGTGC CAATAGTTGT
TGGATCGACA AAGAACAAAG ATCTAGAGAG AAACCTAGTG ATCACGCACC TGTCGTTGTG
GATATAAACT GGCCTCCATC AGATATTGAA AATGAATTTT TCTTCTAA
 
Protein sequence
MLVATWNVNS IRSRIDHVKE WLITNKIDIL CLQETKTEDK FFPIENFSDL GYEVSISGQK 
SYNGVAIISR FPINNIKIGF NEVINDYQDL SILSEQKRII SADINDIRII NVYVPNGSSI
NSDKFIYKKK WLECLQVYLR EINKNNTPIC LLGDFNIAPE DRDIHTPSRY EESIMASSKE
RELLKDALGG ELEDVFRIFE PGEKNWSWWD YRHSAWERDK GWRIDHIYLT EDILSCANSC
WIDKEQRSRE KPSDHAPVVV DINWPPSDIE NEFFF