Gene NATL1_05371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_05371 
Symbol 
ID4780479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp486411 
End bp486908 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content28% 
IMG OID640083814 
Productputative nucleotide-binding protein 
Protein accessionYP_001014364 
Protein GI124025248 
COG category[S] Function unknown 
COG ID[COG1666] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.280334 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTCTT CTTATTCTTT TGACGTGGTT TCAGAATTTG ATCAGCAGGA ATTAGTAAAT 
GCTATTGATC AATTGAGGAG AGAAGTTGAT CAAAGGTATG ATCTAAAAGA CTCAAAGACA
AAAATTGATA TTAAAGAAGA TGAACTATCT ATTGTTTCTC TTAGCGATAT GACAATTGAA
TCTGTAAAAG ATATTTTATT ACAAAAAGCT ACTAAAAGAA ATTTATCATT AAAGATATTT
GATTTTCAAA AGATTGAAAC TATAGGAGGA AATATGGTAA TGCAAATTGT TAAACTAAAG
AAAGGACTGT CTCAAGAAAT ATCAAAAAAA TTAAGTAAGT TAGTTCGAGA TAATATGAAG
AAAGTAACTG CATCAATACA AGGAGATAGT TTGAGAATTA CAGGAAAAAA TAAAGATGAT
TTACAAGCTG CAATTAATTT AATTAAGAAA CAGGAGGAGG AATTAGATAT AGCTCTTCAA
TTTCAAAATT ATAGATAG
 
Protein sequence
MPSSYSFDVV SEFDQQELVN AIDQLRREVD QRYDLKDSKT KIDIKEDELS IVSLSDMTIE 
SVKDILLQKA TKRNLSLKIF DFQKIETIGG NMVMQIVKLK KGLSQEISKK LSKLVRDNMK
KVTASIQGDS LRITGKNKDD LQAAINLIKK QEEELDIALQ FQNYR