Gene NATL1_05351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_05351 
Symbolpta 
ID4780481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp484635 
End bp485726 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content39% 
IMG OID640083812 
Productphosphotransacetylase domain-containing protein 
Protein accessionYP_001014362 
Protein GI124025246 
COG category[R] General function prediction only 
COG ID[COG0857] BioD-like N-terminal domain of phosphotransacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.204674 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGA CCTTTCTGAT TGGATCATGC GAACCATTTA GCGGTAAGTC AGCATTAGTT 
CTTGGCATAG CAAGGAATTT AATTGCTTCA AATCATATGG TTAGATTTGG TAAACCATTA
GCCACAAGCC TTGAATTAAA TGTCTCTGAA AGAGGAGACA TTCAAGATAT GATTGATGAT
GATGTCCGAT TCGTTGGGGA GACATTACAA TTATCTGCTG AGAATTTAAT TCCTTCCATT
CAATTTTTGG CAGCTTCTAC TGCTAGTGAG AGGATTCAAA AAAATACTTT AGATCCGGGG
GGGGGATTTG ACGAGTTCCG CTTATCTCTC AATTCTTCTG GTGAGGCTAT CAATATTCTT
GAAGCAGCAG GTAGTTTGCA TGAGGGCCTA TTGTATGGAT TAAGTCTCCC TCAACTAGCT
AAAGGTTTAA AGGCTAAAGT TTTACTTGCT CATTTCTGGC AAGATAGTAG AAGTGTTGAA
GCTTTATTGG AGGCTAAAAA TCAGCTAGGA GACCATCTAA GTGGTGTAAT TTTAAATGCG
GTTAACCCTG ATCAAATCAA AGATATTAAA GAAAATATAG TTCCATCTCT TAAGGCATTA
GGTTTAGATA TCTTTGGAGT AATGCCTAGG TCTCCTTTGT TGAGGAGTGT CACTGTTGAA
GAATTGGTGA GACGTTTAAA TGCTCGAGTT ATTTGTTGCT CTGACAGGCT TGAGTTGATG
GTCGAGACAT TAAGCATAGG GGCGATGAGT GTTAATTCTG CAATGGAATT TTTTCGAAGA
AGGCGTAATA TGGCCGTAGT GACCGGAGCA GATCGAACAG ATATACAATT GGCGGCTTTG
GAAGCTTCGA CTCAGTGTTT AATATTAACA GGAGCTGGCG AACCTCTACC ACAATTGATT
AATAGATCAG AAGAGTTAGA TGTTCCATTG CTAAAAGTTG ATAGAGATAC TCTTTCAACA
GTTGAGGTCA TTGAACAAGC CTTTGGTCAT GTTCGTCTTC ATGAGACAGT CAAAGCTACT
TATGCTTTTC GTTTAGTACA AGAACATTGC GATCTCGATC GAATCTTTAA AACTTTAGGA
ATTTCTTCTT GA
 
Protein sequence
MSKTFLIGSC EPFSGKSALV LGIARNLIAS NHMVRFGKPL ATSLELNVSE RGDIQDMIDD 
DVRFVGETLQ LSAENLIPSI QFLAASTASE RIQKNTLDPG GGFDEFRLSL NSSGEAINIL
EAAGSLHEGL LYGLSLPQLA KGLKAKVLLA HFWQDSRSVE ALLEAKNQLG DHLSGVILNA
VNPDQIKDIK ENIVPSLKAL GLDIFGVMPR SPLLRSVTVE ELVRRLNARV ICCSDRLELM
VETLSIGAMS VNSAMEFFRR RRNMAVVTGA DRTDIQLAAL EASTQCLILT GAGEPLPQLI
NRSEELDVPL LKVDRDTLST VEVIEQAFGH VRLHETVKAT YAFRLVQEHC DLDRIFKTLG
ISS