| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_05311 |
|---|
| Symbol | rplS |
|---|
| ID | 4780582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | - |
|---|
| Start bp | 482086 |
|---|
| End bp | 482574 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640083808 |
|---|
| Product | 50S ribosomal protein L19 |
|---|
| Protein accession | YP_001014358 |
|---|
| Protein GI | 124025242 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0335] Ribosomal protein L19 |
|---|
| TIGRFAM ID | [TIGR01024] ribosomal protein L19, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.105613 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTCG ATTCGAAAGA GCCCTCATCA GAAGAGGTAA AAATTGAAGA TGAATCAAAT
GCTTCAGAGG ACTCTGGGGT AAAAACAGCT TCTGAAAACA AATCTAAAGG AAAGAAAATT
TCAATTAAGA ATCTCTCTCC TGCAGAAATA ATAAAGACTT TTGAAGATGC GCAACTAGGC
AAAGATCTCC CTGATATTTA CGTTGGAGAT ACCGTTCGTG TTGGTGTCCG AATTAGTGAG
GGCAATAAGG AGAGGGTGCA GCCCTATGAG GGAGTTGTAA TAGCAAAGAG ACATGGAGGA
ATTCATCAAA CAATTACCGT AAGGAGAATT TTCCAAGGAA TAGGAGTTGA GAGAATTTTT
CTGGTTCACA GTCCACAAGT TGCATCGATT AAGGTTGAGC GCCGAGGTAA AGTAAGAAGA
GCGAAGCTTT TCTATCTGCG TGAGCGAGTA GGCAAAGCCA CACGCGTCAA GCAGCGCTTC
GACCGCTGA
|
|---|
| Protein sequence | MSVDSKEPSS EEVKIEDESN ASEDSGVKTA SENKSKGKKI SIKNLSPAEI IKTFEDAQLG
KDLPDIYVGD TVRVGVRISE GNKERVQPYE GVVIAKRHGG IHQTITVRRI FQGIGVERIF
LVHSPQVASI KVERRGKVRR AKLFYLRERV GKATRVKQRF DR
|
|---|
| |