Gene NATL1_05281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_05281 
SymbolnhaP 
ID4780638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp478802 
End bp480046 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content43% 
IMG OID640083803 
ProductCPA1 family Na+/H+ antiporter 
Protein accessionYP_001014355 
Protein GI124025239 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0626531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0646135 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCCTG AGCGACTGGG TTTGCTCTGG GGCATCACAG TTTTTTCTGG GGCGGGAGCA 
AGATTACTAT CAGTGCTAAC AGGACTTCCT GGGGTGGTTT TGTTGTTGCT ATCTGGCTTG
TTGATTGGGA GATCAGGTCT TGGATTGGTT GAACCTTTAG ATCTAGGTAA GGGGTTGGAG
ACAATAGTTG GTTTGTTGGT AAGCCTTGTT TTGTTTGATG GTGGTTTGAA TCTTCGATTT
CCTGGAGGGG CAATCAAGTC AATAGTTCTA AGAATTTCCT CAATTAGATT AATTATTTCA
TTGGCAGCTG GCTTCTTTGC TGCACATTGG TTTGCAGGAC TTGGTTGGTC AGTCGCAGGA
GTTTATAGCG CGATTGTTCT TGCTACTGGG CCAACGGTTG TAACTCCTTT AGTTCGACAA
ATTCGACTTG CATCGCCGTT GAGTGATGTT CTTGAAGCTG AAGGTTTGAT ACTCGAACCT
ATTGGAGCAG TGCTTGCACT TTTGTTGTTA GAGCTTGTTG TTGGAGATTT ACATGGCTGG
AGAGAGCTTT TTCTTGGTTT GCTTTCAAGG CTTGGAGGAG GAGTTTTAAT TGGGTCACTC
GCAGGTCTTT TCCTTTCAGA GGGTTTGAAG CGCTTACGTT CTGAGCCTTA TATCGGGATC
AGATTACAAC TTACTCTTGG AGTAGTTTTT CTGCTTTATG GCGTATGTGA ATGGTTGTTA
CCTGAATCAG GATTGCCGGC ATCTGTTGCT GCAGGATTTG TGGTAGGACA AAGACCTTCT
ACACAGGCGA ATGAACTTGA TAAATTAATA AGAGAATTAG CTCAGTTAGC AATAACTATG
CTTTTTCCTT TATTAGCTGC CGACGTTTCA TGGGGTGAAT TGAGTCCCTT GGGCTGGGGA
GGTATAACTT GCGTACTTTT TCTGATGATC ATAGTGAGGC CAATAGCTGT ATCGATAGCA
ACTTATGGAT TGCCTCTTGA TAATAAACAA AGATTATTTC TTGGTTGGTT AGCTCCCCGT
GGAATAGTGA CTGCAGCAGT TGCTTCTTTG TTCTCCATTA GATTGGAGCA GGCAGGTGTT
TTAGGGGCTG GAAAACTTCA GGGATTAGTC TTTTTGACAA TATTAATGAC AGTAGGTATT
CAAGGTTTAA CAGCTCAACC ATTGGCAAAA ATGTTGGGTC TACTGGATGA AGATAAAGAT
TTAGATAAGC CGACTAATTC GGGCTCTATC TTTACTGAAT CTTGA
 
Protein sequence
MTPERLGLLW GITVFSGAGA RLLSVLTGLP GVVLLLLSGL LIGRSGLGLV EPLDLGKGLE 
TIVGLLVSLV LFDGGLNLRF PGGAIKSIVL RISSIRLIIS LAAGFFAAHW FAGLGWSVAG
VYSAIVLATG PTVVTPLVRQ IRLASPLSDV LEAEGLILEP IGAVLALLLL ELVVGDLHGW
RELFLGLLSR LGGGVLIGSL AGLFLSEGLK RLRSEPYIGI RLQLTLGVVF LLYGVCEWLL
PESGLPASVA AGFVVGQRPS TQANELDKLI RELAQLAITM LFPLLAADVS WGELSPLGWG
GITCVLFLMI IVRPIAVSIA TYGLPLDNKQ RLFLGWLAPR GIVTAAVASL FSIRLEQAGV
LGAGKLQGLV FLTILMTVGI QGLTAQPLAK MLGLLDEDKD LDKPTNSGSI FTES