Gene NATL1_05141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_05141 
SymbolcobM 
ID4780870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp468769 
End bp469527 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content36% 
IMG OID640083789 
Productputative precorrin-4 C11-methyltransferase 
Protein accessionYP_001014341 
Protein GI124025225 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2875] Precorrin-4 methylase 
TIGRFAM ID[TIGR01465] precorrin-4 C11-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.614023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.388015 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCGA TTTCAATTGT TGGCGCAGGT CCAGGCGCTT TAGACTTAAT GACAATAAGA 
GCTCAACAAA GAATTAAATC AGCAGATGTT CTTCTTTGGA CAGACTCTCT CATTCCTATA
CAAATAACAA ATTTTGTTAA AGATGATTGT GAAAAGATAA AGACAAGTTC ATTAACACTA
GAAGAAATAC TTTTAATCTT AATTAAAAAG CATAAGGAAG GTAAAAAAAT TGTTCGTCTC
CATGATGGTG ATCCTTGCTT ATATGGAGCC ATATCAGAAC AAATATGCAG ATTAAATGAT
GAAGGGATTG AGGTAGAAGT AGTACCGGGA GTAAGCGCAT ATCAAGCAAC AGCAGCAACT
TTAGGATTCG AACTAACAGT TCCAGATTTA ACCCAAACAA TAATACTAAG CAGAGCTGAT
GGTAGGACAG GAAAACCAGA GAGGGAGAGC CTTCAAAAGC TAGCATCTAT TCAATCTTCT
TTATGTCTCT ACCTAAGTGC AAGACATGTG GAAGAAGTGC AATCCATACT TATAAAGTAT
TATCCTGCGA ACACCCCTGT AGCAATTGCA TATAGAGTAA CTTGGCCAGA CGAATGGATA
AAAGTCATAC CTTTGAATGA GATGGCAAAA ACATCTCAAG AACAAAATTT GATCAGAACA
ACTTTATATA TAATCAGTCC AACTCTAAAG ATCGGTAATA ATAGATCAAA GCTTTATAAT
CCTACTCATT CGCATTTATT TAGGTCGAGT TCAAGATAA
 
Protein sequence
MNPISIVGAG PGALDLMTIR AQQRIKSADV LLWTDSLIPI QITNFVKDDC EKIKTSSLTL 
EEILLILIKK HKEGKKIVRL HDGDPCLYGA ISEQICRLND EGIEVEVVPG VSAYQATAAT
LGFELTVPDL TQTIILSRAD GRTGKPERES LQKLASIQSS LCLYLSARHV EEVQSILIKY
YPANTPVAIA YRVTWPDEWI KVIPLNEMAK TSQEQNLIRT TLYIISPTLK IGNNRSKLYN
PTHSHLFRSS SR