Gene NATL1_05101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_05101 
Symbol 
ID4780899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp464655 
End bp465530 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content41% 
IMG OID640083785 
Productputative carboxypeptidase 
Protein accessionYP_001014337 
Protein GI124025221 
COG category[V] Defense mechanisms 
COG ID[COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.252478 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAC CTATAAAGAA AGGAGATCAT TTCCACATAG TTGCGGCAAG TTCGCCAATA 
ACTAAAAAAG AAGATCTTCA CTCAGGGATC AAAGTCCTTC AGGAATGGGG ATTGATATGT
AACCATTTCG ATGAAATAGA TAGGTCATGG GGTTATTTAG CAGGTAATGA TGAAGTTAGA
TTTAATGAAT TACACCCAAG CAAACATTAC CCTCTCTTAG CTTTTGCTAG AGGTGGGTGG
GGATCAGCAA GATTGCTAGA AAAACAACAA CCATGGAAAG AAGGTTGGAT GATAGGCTTT
TCTGATTTGA CTTCCATACT TCTTGCGCGG CTAGCCAGTG GATTTCAAGG AGGCATTCAT
GGTCCACTAA TTACAACTTT AGGTTCCGAA CCAGATTGGA GTAAAGACAG GCTTAAATCA
ATTTTGTTTG GCAATTGCGT ACCAGATATT TATGGGGAGC CGTGGGGGGG AGGAATTTCA
AAGGGGCGTC TGATAGTTGG CAACCTCACT GTCCTGACTC ACTTAATTGG GACTGAACAT
CTCCCAAGTT TCAAAAAATC AATTCTAATC ATCGAAGATA TTGGAGAAGC TCCCTACAGA
ATTGACAGAA TGCTAACTCA CTTAAGATTG GCTGGAGTTC TACATCAGCT ATCTGGTCTA
GGTTTTGGTT CATTTACAAG GTGTGATGAT GAGAAGGACG TCGACAAATC AAAGACGTTT
AAGCTTCTTG ATATTTTCAA AGATCGAACA CAAGACCTTA AAATCCCAAT CGTTTCAAGT
CTGCCTATTG GACACTGCTG TGGGAATGCA TCACTTCCAC TAGGTAGTCA AGCCATCTTG
AATGGCGACA AAGGGAGCCT TAGTCTTTTA AAGTAG
 
Protein sequence
MTEPIKKGDH FHIVAASSPI TKKEDLHSGI KVLQEWGLIC NHFDEIDRSW GYLAGNDEVR 
FNELHPSKHY PLLAFARGGW GSARLLEKQQ PWKEGWMIGF SDLTSILLAR LASGFQGGIH
GPLITTLGSE PDWSKDRLKS ILFGNCVPDI YGEPWGGGIS KGRLIVGNLT VLTHLIGTEH
LPSFKKSILI IEDIGEAPYR IDRMLTHLRL AGVLHQLSGL GFGSFTRCDD EKDVDKSKTF
KLLDIFKDRT QDLKIPIVSS LPIGHCCGNA SLPLGSQAIL NGDKGSLSLL K