Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_04961 |
Symbol | ribE |
ID | 4781050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | + |
Start bp | 452199 |
End bp | 452852 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640083771 |
Product | riboflavin synthase subunit alpha |
Protein accession | YP_001014323 |
Protein GI | 124025207 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0307] Riboflavin synthase alpha chain |
TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.184408 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTACTG GTTTAATTCA GGCTATTGGC ACGATCAAGA AAAATAATTT GGGGGTAATT GTTGATGGAT GTAACCCTTT CTCTCCGTTA AAACTTGGAG ATAGTGTGTC TGTTGATGGA GTGTGTCTAA CAGTTTCTGA GTTGATGAAT GATTCTTTTT TCTCAAATAT AAGTGAAGAG ACTCTTAAGA GAACAAATCT TGCAGAAAAA GCTCAGAAAA ATGGTTATGT AAATCTTGAG CCAGCATTAC GTCTGTCTGA CCGATTAGGT GGACATATTG TAAGTGGACA CATTGACGGG TTGGGTAAAG TTGTTTCAAT CGAAAATTTG AAAAATTCTT GGAATTTGAG AGTATCTTGG GATGATTTAA ACTTTTGCAG ATATATGTGC GATAAGGCTA GTATTAGCCT AAATGGAATA AGTCTTACTA TTGCTGAGAT CTATGTTGAT GGGTGTGAAT TTTCAGTAGC CGTAATACCT CATACGTGGT CAAATACATG CTTGAAGTTT TTGACAATTG GAGAAAAGGT TAATTTGGAA GTTGACTTGA TGGCTAAGTA CGCAGAAAAA CTTCTAAAAG TAAATAATAA TGATTCCATT TCGAAACAAA GCCCAGTAAT TAATTCTCAA TGGCTAAGTG AGCAAGGTTG GTAA
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Protein sequence | MFTGLIQAIG TIKKNNLGVI VDGCNPFSPL KLGDSVSVDG VCLTVSELMN DSFFSNISEE TLKRTNLAEK AQKNGYVNLE PALRLSDRLG GHIVSGHIDG LGKVVSIENL KNSWNLRVSW DDLNFCRYMC DKASISLNGI SLTIAEIYVD GCEFSVAVIP HTWSNTCLKF LTIGEKVNLE VDLMAKYAEK LLKVNNNDSI SKQSPVINSQ WLSEQGW
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