Gene NATL1_04961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_04961 
SymbolribE 
ID4781050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp452199 
End bp452852 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content35% 
IMG OID640083771 
Productriboflavin synthase subunit alpha 
Protein accessionYP_001014323 
Protein GI124025207 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0307] Riboflavin synthase alpha chain 
TIGRFAM ID[TIGR00187] riboflavin synthase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.184408 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTACTG GTTTAATTCA GGCTATTGGC ACGATCAAGA AAAATAATTT GGGGGTAATT 
GTTGATGGAT GTAACCCTTT CTCTCCGTTA AAACTTGGAG ATAGTGTGTC TGTTGATGGA
GTGTGTCTAA CAGTTTCTGA GTTGATGAAT GATTCTTTTT TCTCAAATAT AAGTGAAGAG
ACTCTTAAGA GAACAAATCT TGCAGAAAAA GCTCAGAAAA ATGGTTATGT AAATCTTGAG
CCAGCATTAC GTCTGTCTGA CCGATTAGGT GGACATATTG TAAGTGGACA CATTGACGGG
TTGGGTAAAG TTGTTTCAAT CGAAAATTTG AAAAATTCTT GGAATTTGAG AGTATCTTGG
GATGATTTAA ACTTTTGCAG ATATATGTGC GATAAGGCTA GTATTAGCCT AAATGGAATA
AGTCTTACTA TTGCTGAGAT CTATGTTGAT GGGTGTGAAT TTTCAGTAGC CGTAATACCT
CATACGTGGT CAAATACATG CTTGAAGTTT TTGACAATTG GAGAAAAGGT TAATTTGGAA
GTTGACTTGA TGGCTAAGTA CGCAGAAAAA CTTCTAAAAG TAAATAATAA TGATTCCATT
TCGAAACAAA GCCCAGTAAT TAATTCTCAA TGGCTAAGTG AGCAAGGTTG GTAA
 
Protein sequence
MFTGLIQAIG TIKKNNLGVI VDGCNPFSPL KLGDSVSVDG VCLTVSELMN DSFFSNISEE 
TLKRTNLAEK AQKNGYVNLE PALRLSDRLG GHIVSGHIDG LGKVVSIENL KNSWNLRVSW
DDLNFCRYMC DKASISLNGI SLTIAEIYVD GCEFSVAVIP HTWSNTCLKF LTIGEKVNLE
VDLMAKYAEK LLKVNNNDSI SKQSPVINSQ WLSEQGW