Gene NATL1_04931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_04931 
Symbol 
ID4781066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp449218 
End bp449904 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content38% 
IMG OID640083768 
Producthypothetical protein 
Protein accessionYP_001014320 
Protein GI124025204 
COG category[S] Function unknown 
COG ID[COG4241] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.503392 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.44137 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACTTAG ATAATAAAAA CTCTTTAAAA AGTAGATCTC TTTATAAAGC CCCTCTAAGT 
AAGAGACAAG CTTTGAAAAT CGTTGAGTCC TCTTATCTTG CGGCTGCAAC AGCTTTGATT
TGGATAGCTC TTTATTATTT GCCTATTGGC GGAGCTGTTT TTCGTCTTGC TTTACCATTG
CCATTGGCTC TTCTTCAAAT TCGGAGAGGT GTCAAAACAG GTATTGAGGG AGTGACAATA
TGCGTAATGC TATTAACTGC TCTGATGGGT CCGCTAAGAG GACCTTTAGT GCTTTTTCCG
TATGGATTGC TTTCCTTATG GTTAGGATAT TGTTGGGAAA AGGGATGGAA TTGGTGGTTA
AGTTGGAGTG TTGGAGTCTC GATTGGAACG ATGGGTTTTC TTGTTAGGGT TTTCGTTTTG
TCTTTGTTGG TTGGTGAGAA TCTATGGGTT ATTCTTACTC GTGCTGGAGC GGGATTGCTT
GAAAAGGGAA TAGATATTTT TAATCTTTCT TTTACTCCCG ATATGAGACA AGTTCAAATA
GTTGCACTAT GTCTAATTAT TACTCAAGAA ATCATTTACG TTCTATGTTT GCATGCTTTG
GCTTATTGGA TTTTCCCTAG ACTTAAGTCA TCGATACCTG AACCACCCGC TTTGCTAGAA
AAATTAATTT CTCTAGAATC TAACTGA
 
Protein sequence
MNLDNKNSLK SRSLYKAPLS KRQALKIVES SYLAAATALI WIALYYLPIG GAVFRLALPL 
PLALLQIRRG VKTGIEGVTI CVMLLTALMG PLRGPLVLFP YGLLSLWLGY CWEKGWNWWL
SWSVGVSIGT MGFLVRVFVL SLLVGENLWV ILTRAGAGLL EKGIDIFNLS FTPDMRQVQI
VALCLIITQE IIYVLCLHAL AYWIFPRLKS SIPEPPALLE KLISLESN