Gene NATL1_04881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_04881 
SymbolsalX 
ID4781087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp443423 
End bp444130 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content38% 
IMG OID640083765 
ProductABC transporter ATP-binding protein 
Protein accessionYP_001014317 
Protein GI124025201 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.134366 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTTAACC AATTAAAATC ATTGAAAAAG TCTGTAGCGC GACTAACTAA TATAAATAAA 
TTTTATGGGG AAGGCTCAGT CAAAGTGAAA GCTCTTGACG AACTAAACCT TGAGGTTTAT
CAGGGCGATT ACCTTGCTGT TATGGGTGCA AGTGGATCTG GGAAAAGTAC TGCAATGAAT
ATACTTGGAT GCCTTGATCG TCCTACTAAT GGGACTTATG AATTAAATGG AACTGCTGTA
GAAAAGCTTG ATGATGACTT GCTAGCAGAT ATTAGAAACA AAGAACTTGG TTTTGTTTTT
CAACAATTTC ATCTCCTTCA AGAAATTTCA GCACTTGAGA ATGTCATGCT TCCAATGATT
TATGCATGCG TCCCTTCTTT ACAGAGAGAG AAGCGCGCTG AAGAGGCTCT TAAACGAGTA
GGGCTTGGGA ATAGGATGAC CAATCTTCCT AATCAATTAT CAGGTGGACA ACAACAACGA
GTTGCCATAG CAAGGGCAAT AATCAATAAA CCATCCCTGT TATTAGCAGA CGAACCAACT
GGTGCTCTTG ATTCCAAAAC TACTGAAGAT GTTTTAAATC TGTTTGACCA ACTTCATAGT
CAAGGAATCA CAATTGTCTT AGTTACTCAT GAAGACAATG TTGCTCAAAG AGCAAAAAAA
ATAGCACGGT TTAGAGATGG CAAAGTAATA GAGATTACTC ATAATTAG
 
Protein sequence
MVNQLKSLKK SVARLTNINK FYGEGSVKVK ALDELNLEVY QGDYLAVMGA SGSGKSTAMN 
ILGCLDRPTN GTYELNGTAV EKLDDDLLAD IRNKELGFVF QQFHLLQEIS ALENVMLPMI
YACVPSLQRE KRAEEALKRV GLGNRMTNLP NQLSGGQQQR VAIARAIINK PSLLLADEPT
GALDSKTTED VLNLFDQLHS QGITIVLVTH EDNVAQRAKK IARFRDGKVI EITHN