Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_04881 |
Symbol | salX |
ID | 4781087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | - |
Start bp | 443423 |
End bp | 444130 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640083765 |
Product | ABC transporter ATP-binding protein |
Protein accession | YP_001014317 |
Protein GI | 124025201 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.134366 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGTTAACC AATTAAAATC ATTGAAAAAG TCTGTAGCGC GACTAACTAA TATAAATAAA TTTTATGGGG AAGGCTCAGT CAAAGTGAAA GCTCTTGACG AACTAAACCT TGAGGTTTAT CAGGGCGATT ACCTTGCTGT TATGGGTGCA AGTGGATCTG GGAAAAGTAC TGCAATGAAT ATACTTGGAT GCCTTGATCG TCCTACTAAT GGGACTTATG AATTAAATGG AACTGCTGTA GAAAAGCTTG ATGATGACTT GCTAGCAGAT ATTAGAAACA AAGAACTTGG TTTTGTTTTT CAACAATTTC ATCTCCTTCA AGAAATTTCA GCACTTGAGA ATGTCATGCT TCCAATGATT TATGCATGCG TCCCTTCTTT ACAGAGAGAG AAGCGCGCTG AAGAGGCTCT TAAACGAGTA GGGCTTGGGA ATAGGATGAC CAATCTTCCT AATCAATTAT CAGGTGGACA ACAACAACGA GTTGCCATAG CAAGGGCAAT AATCAATAAA CCATCCCTGT TATTAGCAGA CGAACCAACT GGTGCTCTTG ATTCCAAAAC TACTGAAGAT GTTTTAAATC TGTTTGACCA ACTTCATAGT CAAGGAATCA CAATTGTCTT AGTTACTCAT GAAGACAATG TTGCTCAAAG AGCAAAAAAA ATAGCACGGT TTAGAGATGG CAAAGTAATA GAGATTACTC ATAATTAG
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Protein sequence | MVNQLKSLKK SVARLTNINK FYGEGSVKVK ALDELNLEVY QGDYLAVMGA SGSGKSTAMN ILGCLDRPTN GTYELNGTAV EKLDDDLLAD IRNKELGFVF QQFHLLQEIS ALENVMLPMI YACVPSLQRE KRAEEALKRV GLGNRMTNLP NQLSGGQQQR VAIARAIINK PSLLLADEPT GALDSKTTED VLNLFDQLHS QGITIVLVTH EDNVAQRAKK IARFRDGKVI EITHN
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