| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_04861 |
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| Symbol | pspA |
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| ID | 4781114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | + |
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| Start bp | 441844 |
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| End bp | 442620 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640083763 |
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| Product | membrane-associated 30 kDa-like protein |
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| Protein accession | YP_001014315 |
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| Protein GI | 124025199 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.151825 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGATTAT TCGATAGGTT AAGTCGATTG ATAAGGGCAA ATCTAAATGC TTTTGTCAGT
GATGCAGAAG ATCCAATAAA AATACTTGAT CAGTCTGTTG CTGATATGCA AGAAGACTTG
GTGAAGCTTC GTCAAGCTGT CGCTATGGCT ATTGCAAGTC AAAAAAGATT AGAGAATCAG
GCAAATCAAG CAAAAGAGCA AATAAAAAAT TGGTTTAACA GAGCTGAATT AGCCTTAAAA
AAGGGAGAGG ATGATCTAGC TAGAGAAGCA TTAAGTAGAA AAAAAACTTT TCAAGAAACT
TATGAATCTT TATCGACTCA ATTTCAAACA CAAAATGGTC AAGTTGAAAA ACTAAAGAAA
AGCCTTTTGC TATTAGAGAG AAAGATTGCC GAGGCTCGAA CTAAAAAAGA TATGCTTAAA
GCAAGAGCTC AGGCAGCCAA AGCTCAGCAA CAAATTCAAA GTGCAGTTGG TGATTTAGGG
AGCAAGTCCG CCATGGCTGC TTTTGAAAGA ATGGAAGATA AAGTAGAGGC ATTGGAAGCC
TCTGGGCAAG CTGCATTAGA GTTGGCTGGA GAAGATCTAG AAAGTAAGTT CGCAGCATTA
GAAGGAGGTG ATGATATAGA GAAAGAATTA GAGATATTGA GGACTCAATT GAAATCGGGG
GTAGAGGTAA TAGCTTTGCC TCCGTCTGAT TTAGATGTCA ATGAAGTGAA AACAGTAGAA
ATCCAAGAAG TTGAAGTTGA ATTAGAGGAG ATGAAAAAAT CAATGGATAA TTCTTGA
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| Protein sequence | MGLFDRLSRL IRANLNAFVS DAEDPIKILD QSVADMQEDL VKLRQAVAMA IASQKRLENQ
ANQAKEQIKN WFNRAELALK KGEDDLAREA LSRKKTFQET YESLSTQFQT QNGQVEKLKK
SLLLLERKIA EARTKKDMLK ARAQAAKAQQ QIQSAVGDLG SKSAMAAFER MEDKVEALEA
SGQAALELAG EDLESKFAAL EGGDDIEKEL EILRTQLKSG VEVIALPPSD LDVNEVKTVE
IQEVEVELEE MKKSMDNS
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