Gene NATL1_04641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_04641 
SymbolmurE 
ID4780153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp425023 
End bp426552 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content37% 
IMG OID640083741 
ProductUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 
Protein accessionYP_001014293 
Protein GI124025177 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0769] UDP-N-acetylmuramyl tripeptide synthase 
TIGRFAM ID[TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.777732 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCGCGTT ATCTGCACAC TTTGTTGAAA GCAATTGATC TTCAGGTCCG TTCAGGGTTA 
GCAAATCCAG AAATAAAAAA TCTGTCCACT GATTCTAGAG AAATTGAAAA AGGTGATTTG
TTCTTAGGTT TAGACGGTGA AAAAGTTGAT GGGGGGACCT TTTGGGCAAA AGCAATTGAG
AGAGGTGCTT GTGCAGCCAT TATTAGTAAA AAGGCTTCTC TTTTAAATCC GCCAACTAAC
GAAGACCCCG TAGTTATTCT CCCAGAGCCT GTATCACTAT TTATGGGTAA ATTAGCTGCA
GATTTTTGGG GTAAGCCATC TAGTGAGATT TGTTTGATAG GTATTACTGG TACTAACGGA
AAAACGACTA CATCATTTTT AATTGAATTT CTGACTACTT CGCTTGGCCA TCCATCCGCT
TTGTTTGGAA CATTAATTAA TAGATGGCCT AACTATGAGG AAACTTCAAA ATATACAACT
ACTTTTGCGG TCCCTTTGCA GGCAAAACTT AGGAAAGCCG TTCAGGCAGG AGTTGAATAT
GGAGCAATGG AAGTAAGTTC ACATGCGTTG TCTCAGAATA GAGTCGCTGG TTGTGATTTC
AATGGGGCAA TATTTACAAA CCTTTCAAGA GACCATTTAG ATTATCACGA TTCAATGGAA
TCTTATTTTG AGGCTAAAGC TAGTTTGTTC CGATCACATC TGATAGACGA TGATGGTCCT
AGATCAGTAA TTAATATAGA CGATAAATGG GGTTCAATAT TAGCAAAAGA GCTCAACAAA
AAATGTTGGA CATGTTCATT AAAAGAGAAC TCCCAAATCA GAGAGAAACC AGATTTATAT
ATTAGCAATC TTCAAATTAT GCAAGACGGA TACATGGGAA AATTGCATAC GCCATTTGGG
GTGGGAAATT TTATTTCACC ACTAATAGGT GAGTTTAATT TAATGAATAT GTTGCAAGCA
ATAGGAATTT TAGTTCAAAG GGGACTCCCA TTAAATGATC TTTTAGAAGC TTTAAACAAG
TTCCCTGGAG TGCCAGGGAG AATGCAACTG ATAAACATGG ATGGATTTAA AGTAAAAGAC
GGCTATCCAC TAGTGATAGT AGATTATGCT CATACACCAG ATGGTTTACA AAATGCTTTA
ATCGCATCGA GATCATTGAC GAAAAAAAGA TTAATTTGTG TCTTTGGTTG TGGTGGTGAT
AGAGATAAAG GTAAAAGATC TAAGATGGGG GAAGTTGCTG CTAAGTTTGC AGATTATATA
GTTGTGACAT CTGATAATCC TCGACAAGAA GACCCAATCG AAATTATTAA AGATATTCAA
AAGGGTATAA CAATTGATTC TGAAATTTCT GTTGAGCCAG AGAGATCCAT TGCAATTCAA
TTTGCCATAG CAAAAGCCAA GAAAAATGAT GTTGTTTTAA TCGCAGGGAA AGGTCATGAG
GATTATCAAA TTCTAAAAGA TCAGACAATT TATTTTGACG ATCGTGAACA AGCTAGAAAA
GCACTATCTT TAAGAACAGA TGTTATTTGA
 
Protein sequence
MSRYLHTLLK AIDLQVRSGL ANPEIKNLST DSREIEKGDL FLGLDGEKVD GGTFWAKAIE 
RGACAAIISK KASLLNPPTN EDPVVILPEP VSLFMGKLAA DFWGKPSSEI CLIGITGTNG
KTTTSFLIEF LTTSLGHPSA LFGTLINRWP NYEETSKYTT TFAVPLQAKL RKAVQAGVEY
GAMEVSSHAL SQNRVAGCDF NGAIFTNLSR DHLDYHDSME SYFEAKASLF RSHLIDDDGP
RSVINIDDKW GSILAKELNK KCWTCSLKEN SQIREKPDLY ISNLQIMQDG YMGKLHTPFG
VGNFISPLIG EFNLMNMLQA IGILVQRGLP LNDLLEALNK FPGVPGRMQL INMDGFKVKD
GYPLVIVDYA HTPDGLQNAL IASRSLTKKR LICVFGCGGD RDKGKRSKMG EVAAKFADYI
VVTSDNPRQE DPIEIIKDIQ KGITIDSEIS VEPERSIAIQ FAIAKAKKND VVLIAGKGHE
DYQILKDQTI YFDDREQARK ALSLRTDVI