| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_04611 |
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| Symbol | rpsD |
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| ID | 4780141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | - |
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| Start bp | 423559 |
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| End bp | 424167 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640083738 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_001014290 |
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| Protein GI | 124025174 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTAGAT ACCGCGGACC TCGTTTGAGG ATCACGCGAC GCTTGGGAGA CCTACCTGGT
CTCACCCGGA AGGCCGCAAA AAGGTCTCAT CCACCAGGTC AGCACGGCCA AGCCCGTCGC
AAGCGCTCTG AATACGCGAT CCGACTCGAA GAAAAGCAAA AACTTCGATT CAATTATGGT
ATTTCTGAAC GCCAGCTTGT TCGCTACGTA AAGAAAGCTC GTGCTCAGGA GGGTTCCACA
GGAACAAATC TCTTAAAGCT TCTGGAAAAT AGACTTGATA ATGTTTGTTT TAGACTTGGA
TTTGGACCTA CAATCCCAGG CTCAAGACAA TTAGTAAACC ATGGACATGT AACTGTTAAT
GGCAAGATCA CTGACATTGC AAGTTATCAA TGCAAGGCTG GAGATGTTAT TGCTATCAGA
GACAACAAAG CTAGTAAGCA ATTAGCTCAA GCCAACTTAG AATTCCCTGG TCTTGCGAAT
GTTCCTCCAC ACCTTGAGCT TGATAAAACC AAACTCTCGG CAAAGATAAC TGCAAAGACA
GATAGGGAAT GGGTTGCTAT TGAAATTAAT GAATTGTTAG TTGTTGAGTA TTATTCAAGA
AAGGTATAG
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| Protein sequence | MSRYRGPRLR ITRRLGDLPG LTRKAAKRSH PPGQHGQARR KRSEYAIRLE EKQKLRFNYG
ISERQLVRYV KKARAQEGST GTNLLKLLEN RLDNVCFRLG FGPTIPGSRQ LVNHGHVTVN
GKITDIASYQ CKAGDVIAIR DNKASKQLAQ ANLEFPGLAN VPPHLELDKT KLSAKITAKT
DREWVAIEIN ELLVVEYYSR KV
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