| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_04521 |
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| Symbol | lrtA |
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| ID | 4781211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | - |
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| Start bp | 413204 |
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| End bp | 413788 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640083729 |
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| Product | light repressed protein A-like protein |
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| Protein accession | YP_001014281 |
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| Protein GI | 124025165 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCTTC TTATCCATGG ACGCAATCTT GAATTAACTC CATCACTTCG TGATTACACC
AAAACAAAAA TTGATAAAGC AACTCACAAT TTCCAAGAAA TGGTGCAAGA AGCTGATGTC
CACCTCTCAG TCGCTCGAAA TCCTCGCGTG CCACAACAGA CAGCTGAGGT GACTGTCTTT
GCAAACGGAA CAGTAATAAG AGCCCAAGAA AGAAGTGAGA ATCTTTATGC AAGCATCGAC
TTAGTAGCAA ATAAACTTGC ACGACAATTA CGTAAGTACA AAGAGCGACA TAACAGTCAT
AATGTTCATA ATAATCAGTC AACGAAATCA GTCCAAAACG AAAAAATTGA AAATTTTTCT
TCCTCGGATC ATTCGCTCAT TGAAGGTAAA GAACCTCATT TACCTAACCC AGGAGTAAGA
CGCAAATATT TTGAGATGGA TCCTATGACC ATTGAGCAAG CAAGAGTCCA ATTAGACTTG
ATTGATCATG ATTTCTATTT ATTTAGAGAG GAAGAAGGAT CAGCATTACG AGTCATATAT
AGGAGAAATC ACGGAGGATA TGGCGTAATC CAAGAAAAAA GTTAG
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| Protein sequence | MKLLIHGRNL ELTPSLRDYT KTKIDKATHN FQEMVQEADV HLSVARNPRV PQQTAEVTVF
ANGTVIRAQE RSENLYASID LVANKLARQL RKYKERHNSH NVHNNQSTKS VQNEKIENFS
SSDHSLIEGK EPHLPNPGVR RKYFEMDPMT IEQARVQLDL IDHDFYLFRE EEGSALRVIY
RRNHGGYGVI QEKS
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