Gene NATL1_04381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_04381 
SymbolaroQ 
ID4780345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp402442 
End bp402879 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content35% 
IMG OID640083715 
Product3-dehydroquinate dehydratase 
Protein accessionYP_001014267 
Protein GI124025151 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0561971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTTT TACTTATTAA TGGTCCAAAT TTAAATCTTG TTGGGAAAAG GGAACCATCC 
ATATATGGTT CGCAAACTTT AGAAGACATT CAAGAAGAGT TATTGACTTT AGCTAATGAG
CTTGGTGCAA ACCTCAAATT CTTTCAGAGT AATTCAGAGG GCGAGATGAT TGATTGCATT
CAAAACAGTG TTGGTTCCAT TGACGGAATA TTGATTAATG CAGGCGCATA TACACATACC
TCTATTGCTC TTAGAGATGC TTTATTAGGA GTTGCTATTC CTTATGTAGA AGTACATTTA
AGTAATATCT ATTCTAGGGA AGAATTTCGC CATAAATCAT TCCTTTCAGA TAAAGCATTG
GGTTTGGTTT GTGGCTTTGG AGCAAATAGT TATCAACTTG CTTTAGAAGG CATAGTTTCC
TATTTAAAGC GAGTATGA
 
Protein sequence
MDLLLINGPN LNLVGKREPS IYGSQTLEDI QEELLTLANE LGANLKFFQS NSEGEMIDCI 
QNSVGSIDGI LINAGAYTHT SIALRDALLG VAIPYVEVHL SNIYSREEFR HKSFLSDKAL
GLVCGFGANS YQLALEGIVS YLKRV