Gene NATL1_04181 details

Gene Information

• Locus tag: NATL1_04181
• Symbol: petD
• ID: 4780815
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. NATL1A
• Kingdom: Bacteria
• Replicon accession: NC_008819
• Strand: +
• Start bp: 383240
• End bp: 383722
• Gene Length: 483 bp
• Protein Length: 160 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 640083688
• Product: cytochrome b6-f complex subunit IV
• Protein accession: YP_001014247
• Protein GI: 124025131
• COG category: [C] Energy production and conversion
• COG ID: [COG1290] Cytochrome b subunit of the bc complex
• TIGRFAM ID: [TIGR01156] cytochrome b6/f complex subunit IV

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.563109
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCTACTC TTAAGAAACC TGATTTAACC GATACAAAAT TAAGAGCAAA ACTTGCTAAA 
GGTATGGGAC ACAATTATTA CGGAGAACCA GCATGGCCCA ATGACCTATT ATATATATTC 
CCAGTGGTTA TTCTTGGGAC TATTGCCTGT GTTGTTGGTT TAGCAGTTTT AGATCCTGCA 
TTCCTTGGAG ATAAAGCAAA TCCTTTTGCA ACTCCATTAG AGATTCTCCC TGAATGGTAT 
TTATATCCTG TTTTTCAAAT TTTAAGAGTT GTGCCTAATA AGTTACTTGG AATTGCTCTG 
CAGACTTTGA TACCACTAGG ATTAATGATT CTTCCTTTTA TTGAAAACAT AAATAAATTT 
GCTAATCCTT TTAGAAGACC AGTTGCAATG TCATTATTTT TATTTGGAAC TGTTTTGACA 
ATGTATTTAG GTATAGGAGC CTGCCTACCA ATTGATAAAT CTCTTACTTT AGGTTTGTTT 
TAG 

 

Protein sequence

MSTLKKPDLT DTKLRAKLAK GMGHNYYGEP AWPNDLLYIF PVVILGTIAC VVGLAVLDPA 
FLGDKANPFA TPLEILPEWY LYPVFQILRV VPNKLLGIAL QTLIPLGLMI LPFIENINKF 
ANPFRRPVAM SLFLFGTVLT MYLGIGACLP IDKSLTLGLF